Protein–RNA interactions for Protein: Q7Z3Y7

KRT28, Keratin, type I cytoskeletal 28, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28Q7Z3Y7 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
KRT28Q7Z3Y7 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC20.42■□□□□ 0.86
KRT28Q7Z3Y7 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC20.42■□□□□ 0.86
KRT28Q7Z3Y7 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC20.42■□□□□ 0.86
KRT28Q7Z3Y7 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC20.42■□□□□ 0.86
KRT28Q7Z3Y7 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
KRT28Q7Z3Y7 MIR6769A-201ENST00000617340 73 ntBASIC20.42■□□□□ 0.86
KRT28Q7Z3Y7 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
KRT28Q7Z3Y7 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
KRT28Q7Z3Y7 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
KRT28Q7Z3Y7 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
KRT28Q7Z3Y7 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
KRT28Q7Z3Y7 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
KRT28Q7Z3Y7 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
KRT28Q7Z3Y7 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
KRT28Q7Z3Y7 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC20.42■□□□□ 0.86
KRT28Q7Z3Y7 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
KRT28Q7Z3Y7 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
KRT28Q7Z3Y7 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
KRT28Q7Z3Y7 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
KRT28Q7Z3Y7 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
KRT28Q7Z3Y7 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
KRT28Q7Z3Y7 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC20.41■□□□□ 0.86
KRT28Q7Z3Y7 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC20.41■□□□□ 0.86
KRT28Q7Z3Y7 PES1-204ENST00000402284 2144 ntTSL 5 BASIC20.41■□□□□ 0.86
KRT28Q7Z3Y7 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
KRT28Q7Z3Y7 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
KRT28Q7Z3Y7 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
KRT28Q7Z3Y7 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
KRT28Q7Z3Y7 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
KRT28Q7Z3Y7 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
KRT28Q7Z3Y7 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
KRT28Q7Z3Y7 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC20.41■□□□□ 0.86
KRT28Q7Z3Y7 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC20.41■□□□□ 0.86
KRT28Q7Z3Y7 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC20.41■□□□□ 0.86
KRT28Q7Z3Y7 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
KRT28Q7Z3Y7 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
KRT28Q7Z3Y7 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC20.41■□□□□ 0.86
KRT28Q7Z3Y7 NAT9-220ENST00000582870 896 ntTSL 5 BASIC20.41■□□□□ 0.86
KRT28Q7Z3Y7 RPL17P45-201ENST00000586289 509 ntBASIC20.41■□□□□ 0.86
KRT28Q7Z3Y7 AC007881.3-201ENST00000608897 607 ntBASIC20.41■□□□□ 0.86
KRT28Q7Z3Y7 MIR6720-201ENST00000611664 98 ntBASIC20.41■□□□□ 0.86
KRT28Q7Z3Y7 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
KRT28Q7Z3Y7 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
KRT28Q7Z3Y7 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
KRT28Q7Z3Y7 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
KRT28Q7Z3Y7 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
KRT28Q7Z3Y7 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC20.41■□□□□ 0.86
KRT28Q7Z3Y7 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
KRT28Q7Z3Y7 FRMD6-AS1-201ENST00000617151 2229 ntBASIC20.41■□□□□ 0.86
KRT28Q7Z3Y7 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
KRT28Q7Z3Y7 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
KRT28Q7Z3Y7 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
KRT28Q7Z3Y7 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
KRT28Q7Z3Y7 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
KRT28Q7Z3Y7 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
KRT28Q7Z3Y7 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
KRT28Q7Z3Y7 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC20.4■□□□□ 0.86
KRT28Q7Z3Y7 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
KRT28Q7Z3Y7 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
KRT28Q7Z3Y7 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
KRT28Q7Z3Y7 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
KRT28Q7Z3Y7 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC20.4■□□□□ 0.86
KRT28Q7Z3Y7 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC20.4■□□□□ 0.86
KRT28Q7Z3Y7 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC20.4■□□□□ 0.86
KRT28Q7Z3Y7 AC079112.1-201ENST00000454972 939 ntBASIC20.4■□□□□ 0.86
KRT28Q7Z3Y7 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC20.4■□□□□ 0.86
KRT28Q7Z3Y7 AC130709.1-201ENST00000484779 1212 ntBASIC20.4■□□□□ 0.86
KRT28Q7Z3Y7 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC20.4■□□□□ 0.86
KRT28Q7Z3Y7 IGHV3-37-201ENST00000518544 340 ntBASIC20.4■□□□□ 0.86
KRT28Q7Z3Y7 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC20.4■□□□□ 0.86
KRT28Q7Z3Y7 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
KRT28Q7Z3Y7 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC20.4■□□□□ 0.86
KRT28Q7Z3Y7 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC20.4■□□□□ 0.86
KRT28Q7Z3Y7 AC006449.5-201ENST00000610658 2098 ntBASIC20.4■□□□□ 0.86
KRT28Q7Z3Y7 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC20.4■□□□□ 0.86
KRT28Q7Z3Y7 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
KRT28Q7Z3Y7 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
KRT28Q7Z3Y7 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
KRT28Q7Z3Y7 AC009090.5-201ENST00000624886 2285 ntBASIC20.39■□□□□ 0.86
KRT28Q7Z3Y7 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC20.39■□□□□ 0.86
KRT28Q7Z3Y7 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.86
KRT28Q7Z3Y7 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
KRT28Q7Z3Y7 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
KRT28Q7Z3Y7 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
KRT28Q7Z3Y7 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC20.39■□□□□ 0.85
KRT28Q7Z3Y7 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
KRT28Q7Z3Y7 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC20.39■□□□□ 0.85
KRT28Q7Z3Y7 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
KRT28Q7Z3Y7 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
KRT28Q7Z3Y7 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
KRT28Q7Z3Y7 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC20.39■□□□□ 0.85
KRT28Q7Z3Y7 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC20.39■□□□□ 0.85
KRT28Q7Z3Y7 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC20.39■□□□□ 0.85
KRT28Q7Z3Y7 RPS15-202ENST00000585665 467 ntTSL 3 BASIC20.39■□□□□ 0.85
KRT28Q7Z3Y7 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
KRT28Q7Z3Y7 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC20.39■□□□□ 0.85
KRT28Q7Z3Y7 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC20.39■□□□□ 0.85
KRT28Q7Z3Y7 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC20.39■□□□□ 0.85
KRT28Q7Z3Y7 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms