Protein–RNA interactions for Protein: Q7RTM1

OTOP1, Otopetrin-1, humanhuman

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OTOP1Q7RTM1 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
OTOP1Q7RTM1 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
OTOP1Q7RTM1 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC17.64■□□□□ 0.41
OTOP1Q7RTM1 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.64■□□□□ 0.41
OTOP1Q7RTM1 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC17.63■□□□□ 0.41
OTOP1Q7RTM1 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
OTOP1Q7RTM1 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
OTOP1Q7RTM1 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
OTOP1Q7RTM1 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
OTOP1Q7RTM1 AC127383.1-201ENST00000444697 1800 ntBASIC17.63■□□□□ 0.41
OTOP1Q7RTM1 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
OTOP1Q7RTM1 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
OTOP1Q7RTM1 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
OTOP1Q7RTM1 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
OTOP1Q7RTM1 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC17.63■□□□□ 0.41
OTOP1Q7RTM1 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
OTOP1Q7RTM1 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
OTOP1Q7RTM1 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
OTOP1Q7RTM1 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC17.63■□□□□ 0.41
OTOP1Q7RTM1 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
OTOP1Q7RTM1 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC17.63■□□□□ 0.41
OTOP1Q7RTM1 FAM8A4P-201ENST00000435433 1213 ntBASIC17.63■□□□□ 0.41
OTOP1Q7RTM1 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC17.63■□□□□ 0.41
OTOP1Q7RTM1 RN7SL181P-201ENST00000462921 277 ntBASIC17.63■□□□□ 0.41
OTOP1Q7RTM1 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC17.63■□□□□ 0.41
OTOP1Q7RTM1 NCK2-206ENST00000522586 490 ntTSL 5 BASIC17.63■□□□□ 0.41
OTOP1Q7RTM1 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC17.63■□□□□ 0.41
OTOP1Q7RTM1 WDR7-208ENST00000589935 544 ntTSL 4 BASIC17.63■□□□□ 0.41
OTOP1Q7RTM1 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC17.63■□□□□ 0.41
OTOP1Q7RTM1 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
OTOP1Q7RTM1 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC17.63■□□□□ 0.41
OTOP1Q7RTM1 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
OTOP1Q7RTM1 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
OTOP1Q7RTM1 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
OTOP1Q7RTM1 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
OTOP1Q7RTM1 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
OTOP1Q7RTM1 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
OTOP1Q7RTM1 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
OTOP1Q7RTM1 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.63■□□□□ 0.41
OTOP1Q7RTM1 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
OTOP1Q7RTM1 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC17.63■□□□□ 0.41
OTOP1Q7RTM1 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
OTOP1Q7RTM1 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
OTOP1Q7RTM1 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
OTOP1Q7RTM1 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
OTOP1Q7RTM1 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC17.62■□□□□ 0.41
OTOP1Q7RTM1 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
OTOP1Q7RTM1 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
OTOP1Q7RTM1 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
OTOP1Q7RTM1 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
OTOP1Q7RTM1 WARS-232ENST00000556645 2508 ntTSL 5 BASIC17.62■□□□□ 0.41
OTOP1Q7RTM1 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
OTOP1Q7RTM1 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
OTOP1Q7RTM1 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC17.62■□□□□ 0.41
OTOP1Q7RTM1 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
OTOP1Q7RTM1 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
OTOP1Q7RTM1 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
OTOP1Q7RTM1 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
OTOP1Q7RTM1 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.62■□□□□ 0.41
OTOP1Q7RTM1 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
OTOP1Q7RTM1 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC17.62■□□□□ 0.41
OTOP1Q7RTM1 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
OTOP1Q7RTM1 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
OTOP1Q7RTM1 AGK-211ENST00000629555 2765 ntTSL 5 BASIC17.62■□□□□ 0.41
OTOP1Q7RTM1 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
OTOP1Q7RTM1 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
OTOP1Q7RTM1 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
OTOP1Q7RTM1 CMC1-204ENST00000423894 549 ntTSL 2 BASIC17.62■□□□□ 0.41
OTOP1Q7RTM1 AC116609.2-201ENST00000431542 256 ntTSL 5 BASIC17.62■□□□□ 0.41
OTOP1Q7RTM1 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC17.62■□□□□ 0.41
OTOP1Q7RTM1 AC114812.1-204ENST00000449669 728 ntBASIC17.62■□□□□ 0.41
OTOP1Q7RTM1 NOC2LP1-201ENST00000450578 752 ntBASIC17.62■□□□□ 0.41
OTOP1Q7RTM1 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
OTOP1Q7RTM1 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC17.62■□□□□ 0.41
OTOP1Q7RTM1 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC17.62■□□□□ 0.41
OTOP1Q7RTM1 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC17.62■□□□□ 0.41
OTOP1Q7RTM1 AC019193.1-201ENST00000506678 823 ntBASIC17.62■□□□□ 0.41
OTOP1Q7RTM1 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC17.62■□□□□ 0.41
OTOP1Q7RTM1 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC17.62■□□□□ 0.41
OTOP1Q7RTM1 AL353770.1-201ENST00000614915 403 ntBASIC17.62■□□□□ 0.41
OTOP1Q7RTM1 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
OTOP1Q7RTM1 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
OTOP1Q7RTM1 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
OTOP1Q7RTM1 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
OTOP1Q7RTM1 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
OTOP1Q7RTM1 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
OTOP1Q7RTM1 DKFZP434H168-201ENST00000567381 1905 ntBASIC17.62■□□□□ 0.41
OTOP1Q7RTM1 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
OTOP1Q7RTM1 HLA-DQB2-231ENST00000435145 2026 ntBASIC17.62■□□□□ 0.41
OTOP1Q7RTM1 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC17.62■□□□□ 0.41
OTOP1Q7RTM1 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
OTOP1Q7RTM1 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
OTOP1Q7RTM1 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC17.62■□□□□ 0.41
OTOP1Q7RTM1 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
OTOP1Q7RTM1 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC17.62■□□□□ 0.41
OTOP1Q7RTM1 AC009090.5-201ENST00000624886 2285 ntBASIC17.61■□□□□ 0.41
OTOP1Q7RTM1 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC17.61■□□□□ 0.41
OTOP1Q7RTM1 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
OTOP1Q7RTM1 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
OTOP1Q7RTM1 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms