Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC13.98□□□□□ -0.17
SHFQ7M4L6 AC004832.2-201ENST00000426397 482 ntBASIC13.98□□□□□ -0.17
SHFQ7M4L6 NME4-207ENST00000450036 985 ntTSL 3 BASIC13.98□□□□□ -0.17
SHFQ7M4L6 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
SHFQ7M4L6 FXR1-221ENST00000491674 365 ntTSL 2 BASIC13.98□□□□□ -0.17
SHFQ7M4L6 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC13.98□□□□□ -0.17
SHFQ7M4L6 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC13.98□□□□□ -0.17
SHFQ7M4L6 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC13.98□□□□□ -0.17
SHFQ7M4L6 KRT18P58-201ENST00000527480 1120 ntBASIC13.98□□□□□ -0.17
SHFQ7M4L6 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC13.98□□□□□ -0.17
SHFQ7M4L6 RARRES2P9-201ENST00000565168 469 ntBASIC13.98□□□□□ -0.17
SHFQ7M4L6 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC13.98□□□□□ -0.17
SHFQ7M4L6 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC13.98□□□□□ -0.17
SHFQ7M4L6 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC13.98□□□□□ -0.17
SHFQ7M4L6 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SHFQ7M4L6 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SHFQ7M4L6 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SHFQ7M4L6 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SHFQ7M4L6 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SHFQ7M4L6 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
SHFQ7M4L6 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SHFQ7M4L6 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC13.98□□□□□ -0.17
SHFQ7M4L6 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SHFQ7M4L6 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
SHFQ7M4L6 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SHFQ7M4L6 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
SHFQ7M4L6 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC13.98□□□□□ -0.17
SHFQ7M4L6 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SHFQ7M4L6 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC13.98□□□□□ -0.17
SHFQ7M4L6 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
SHFQ7M4L6 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SHFQ7M4L6 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SHFQ7M4L6 WASH3P-207ENST00000560956 1394 ntBASIC13.97□□□□□ -0.17
SHFQ7M4L6 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SHFQ7M4L6 FO538757.1-201ENST00000623083 1397 ntBASIC13.97□□□□□ -0.17
SHFQ7M4L6 AC084364.1-201ENST00000551967 1556 ntBASIC13.97□□□□□ -0.17
SHFQ7M4L6 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SHFQ7M4L6 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SHFQ7M4L6 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
SHFQ7M4L6 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SHFQ7M4L6 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SHFQ7M4L6 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SHFQ7M4L6 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
SHFQ7M4L6 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
SHFQ7M4L6 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SHFQ7M4L6 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC13.97□□□□□ -0.17
SHFQ7M4L6 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SHFQ7M4L6 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
SHFQ7M4L6 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SHFQ7M4L6 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SHFQ7M4L6 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SHFQ7M4L6 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SHFQ7M4L6 AL353705.2-201ENST00000428243 662 ntBASIC13.97□□□□□ -0.17
SHFQ7M4L6 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SHFQ7M4L6 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC13.97□□□□□ -0.17
SHFQ7M4L6 SLC25A39P2-201ENST00000537614 270 ntBASIC13.97□□□□□ -0.17
SHFQ7M4L6 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SHFQ7M4L6 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
SHFQ7M4L6 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SHFQ7M4L6 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SHFQ7M4L6 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC13.97□□□□□ -0.17
SHFQ7M4L6 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
SHFQ7M4L6 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SHFQ7M4L6 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
SHFQ7M4L6 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC13.97□□□□□ -0.17
SHFQ7M4L6 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC13.97□□□□□ -0.17
SHFQ7M4L6 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
SHFQ7M4L6 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SHFQ7M4L6 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SHFQ7M4L6 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SHFQ7M4L6 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SHFQ7M4L6 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SHFQ7M4L6 REXO1L2P-201ENST00000425429 2069 ntBASIC13.97□□□□□ -0.17
SHFQ7M4L6 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SHFQ7M4L6 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
SHFQ7M4L6 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
SHFQ7M4L6 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC13.97□□□□□ -0.17
SHFQ7M4L6 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SHFQ7M4L6 AC079781.5-202ENST00000641784 3743 ntBASIC13.97□□□□□ -0.17
SHFQ7M4L6 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC13.96□□□□□ -0.17
SHFQ7M4L6 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SHFQ7M4L6 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
SHFQ7M4L6 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SHFQ7M4L6 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SHFQ7M4L6 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SHFQ7M4L6 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC13.96□□□□□ -0.17
SHFQ7M4L6 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
SHFQ7M4L6 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC13.96□□□□□ -0.17
SHFQ7M4L6 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC13.96□□□□□ -0.17
SHFQ7M4L6 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
SHFQ7M4L6 BX640514.1-201ENST00000583223 1918 ntBASIC13.96□□□□□ -0.17
SHFQ7M4L6 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SHFQ7M4L6 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SHFQ7M4L6 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SHFQ7M4L6 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SHFQ7M4L6 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
SHFQ7M4L6 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
SHFQ7M4L6 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SHFQ7M4L6 PMP22-202ENST00000395936 816 ntTSL 3 BASIC13.96□□□□□ -0.17
SHFQ7M4L6 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms