Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
SHC4Q6S5L8 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC17.32■□□□□ 0.36
SHC4Q6S5L8 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SHC4Q6S5L8 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SHC4Q6S5L8 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SHC4Q6S5L8 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC17.31■□□□□ 0.36
SHC4Q6S5L8 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SHC4Q6S5L8 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SHC4Q6S5L8 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
SHC4Q6S5L8 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SHC4Q6S5L8 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SHC4Q6S5L8 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC17.31■□□□□ 0.36
SHC4Q6S5L8 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SHC4Q6S5L8 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SHC4Q6S5L8 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
SHC4Q6S5L8 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SHC4Q6S5L8 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SHC4Q6S5L8 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SHC4Q6S5L8 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC17.31■□□□□ 0.36
SHC4Q6S5L8 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC17.31■□□□□ 0.36
SHC4Q6S5L8 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC17.31■□□□□ 0.36
SHC4Q6S5L8 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC17.31■□□□□ 0.36
SHC4Q6S5L8 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SHC4Q6S5L8 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SHC4Q6S5L8 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SHC4Q6S5L8 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SHC4Q6S5L8 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC17.31■□□□□ 0.36
SHC4Q6S5L8 AC104794.3-201ENST00000566840 1248 ntBASIC17.31■□□□□ 0.36
SHC4Q6S5L8 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC17.31■□□□□ 0.36
SHC4Q6S5L8 AC093512.1-201ENST00000617969 520 ntBASIC17.31■□□□□ 0.36
SHC4Q6S5L8 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
SHC4Q6S5L8 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SHC4Q6S5L8 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC17.31■□□□□ 0.36
SHC4Q6S5L8 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC17.31■□□□□ 0.36
SHC4Q6S5L8 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC17.31■□□□□ 0.36
SHC4Q6S5L8 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
SHC4Q6S5L8 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
SHC4Q6S5L8 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SHC4Q6S5L8 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SHC4Q6S5L8 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SHC4Q6S5L8 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
SHC4Q6S5L8 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC17.31■□□□□ 0.36
SHC4Q6S5L8 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SHC4Q6S5L8 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SHC4Q6S5L8 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SHC4Q6S5L8 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SHC4Q6S5L8 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC17.31■□□□□ 0.36
SHC4Q6S5L8 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC17.31■□□□□ 0.36
SHC4Q6S5L8 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SHC4Q6S5L8 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SHC4Q6S5L8 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SHC4Q6S5L8 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC17.3■□□□□ 0.36
SHC4Q6S5L8 PES1-204ENST00000402284 2144 ntTSL 5 BASIC17.3■□□□□ 0.36
SHC4Q6S5L8 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SHC4Q6S5L8 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC17.3■□□□□ 0.36
SHC4Q6S5L8 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC17.3■□□□□ 0.36
SHC4Q6S5L8 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SHC4Q6S5L8 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
SHC4Q6S5L8 AC093525.8-201ENST00000624099 1342 ntBASIC17.3■□□□□ 0.36
SHC4Q6S5L8 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC17.3■□□□□ 0.36
SHC4Q6S5L8 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SHC4Q6S5L8 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
SHC4Q6S5L8 VMA21-202ENST00000370361 693 ntTSL 5 BASIC17.3■□□□□ 0.36
SHC4Q6S5L8 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC17.3■□□□□ 0.36
SHC4Q6S5L8 HLA-K-203ENST00000430151 1046 ntBASIC17.3■□□□□ 0.36
SHC4Q6S5L8 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC17.3■□□□□ 0.36
SHC4Q6S5L8 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC17.3■□□□□ 0.36
SHC4Q6S5L8 RHOA-206ENST00000454011 889 ntTSL 2 BASIC17.3■□□□□ 0.36
SHC4Q6S5L8 AC004066.1-201ENST00000502488 802 ntBASIC17.3■□□□□ 0.36
SHC4Q6S5L8 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC17.3■□□□□ 0.36
SHC4Q6S5L8 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC17.3■□□□□ 0.36
SHC4Q6S5L8 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC17.3■□□□□ 0.36
SHC4Q6S5L8 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC17.3■□□□□ 0.36
SHC4Q6S5L8 AL662799.1-202ENST00000614205 422 ntBASIC17.3■□□□□ 0.36
SHC4Q6S5L8 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
SHC4Q6S5L8 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
SHC4Q6S5L8 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SHC4Q6S5L8 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SHC4Q6S5L8 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SHC4Q6S5L8 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SHC4Q6S5L8 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SHC4Q6S5L8 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SHC4Q6S5L8 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC17.3■□□□□ 0.36
SHC4Q6S5L8 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
SHC4Q6S5L8 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
SHC4Q6S5L8 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
SHC4Q6S5L8 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SHC4Q6S5L8 AP001267.2-201ENST00000532619 2086 ntBASIC17.3■□□□□ 0.36
SHC4Q6S5L8 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SHC4Q6S5L8 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
SHC4Q6S5L8 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SHC4Q6S5L8 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SHC4Q6S5L8 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SHC4Q6S5L8 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SHC4Q6S5L8 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SHC4Q6S5L8 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SHC4Q6S5L8 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
SHC4Q6S5L8 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SHC4Q6S5L8 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SHC4Q6S5L8 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms