Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 FAM185BP-201ENST00000443595 716 ntBASIC14.55□□□□□ -0.08
LPCAT4Q643R3 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC14.55□□□□□ -0.08
LPCAT4Q643R3 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LPCAT4Q643R3 CIPC-205ENST00000555437 566 ntTSL 3 BASIC14.55□□□□□ -0.08
LPCAT4Q643R3 OR7E47P-204ENST00000575924 449 ntBASIC14.55□□□□□ -0.08
LPCAT4Q643R3 AC006557.2-201ENST00000592985 1240 ntBASIC14.55□□□□□ -0.08
LPCAT4Q643R3 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC14.55□□□□□ -0.08
LPCAT4Q643R3 AC092119.3-201ENST00000612618 583 ntBASIC14.55□□□□□ -0.08
LPCAT4Q643R3 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LPCAT4Q643R3 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LPCAT4Q643R3 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC14.55□□□□□ -0.08
LPCAT4Q643R3 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
LPCAT4Q643R3 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC14.55□□□□□ -0.08
LPCAT4Q643R3 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.55□□□□□ -0.08
LPCAT4Q643R3 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC14.55□□□□□ -0.08
LPCAT4Q643R3 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LPCAT4Q643R3 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
LPCAT4Q643R3 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LPCAT4Q643R3 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
LPCAT4Q643R3 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC14.54□□□□□ -0.08
LPCAT4Q643R3 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
LPCAT4Q643R3 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LPCAT4Q643R3 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LPCAT4Q643R3 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
LPCAT4Q643R3 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
LPCAT4Q643R3 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
LPCAT4Q643R3 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
LPCAT4Q643R3 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
LPCAT4Q643R3 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LPCAT4Q643R3 AC118758.2-201ENST00000614242 2813 ntBASIC14.54□□□□□ -0.08
LPCAT4Q643R3 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LPCAT4Q643R3 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC14.54□□□□□ -0.08
LPCAT4Q643R3 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LPCAT4Q643R3 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LPCAT4Q643R3 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
LPCAT4Q643R3 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
LPCAT4Q643R3 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
LPCAT4Q643R3 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LPCAT4Q643R3 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
LPCAT4Q643R3 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC14.54□□□□□ -0.08
LPCAT4Q643R3 ISCU-203ENST00000431221 799 ntTSL 2 BASIC14.54□□□□□ -0.08
LPCAT4Q643R3 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LPCAT4Q643R3 PHKG1P2-201ENST00000457537 863 ntBASIC14.54□□□□□ -0.08
LPCAT4Q643R3 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC14.54□□□□□ -0.08
LPCAT4Q643R3 AL031432.2-201ENST00000566714 459 ntBASIC14.54□□□□□ -0.08
LPCAT4Q643R3 AL928711.1-201ENST00000570165 459 ntBASIC14.54□□□□□ -0.08
LPCAT4Q643R3 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC14.54□□□□□ -0.08
LPCAT4Q643R3 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC14.54□□□□□ -0.08
LPCAT4Q643R3 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LPCAT4Q643R3 DBP-204ENST00000599385 709 ntTSL 3 BASIC14.54□□□□□ -0.08
LPCAT4Q643R3 AC008667.4-201ENST00000607370 168 ntBASIC14.54□□□□□ -0.08
LPCAT4Q643R3 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC14.54□□□□□ -0.08
LPCAT4Q643R3 BCL10-202ENST00000620248 774 ntTSL 5 BASIC14.54□□□□□ -0.08
LPCAT4Q643R3 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LPCAT4Q643R3 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC14.54□□□□□ -0.08
LPCAT4Q643R3 AC055811.4-201ENST00000624039 1754 ntBASIC14.54□□□□□ -0.08
LPCAT4Q643R3 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
LPCAT4Q643R3 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC14.54□□□□□ -0.08
LPCAT4Q643R3 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC14.54□□□□□ -0.08
LPCAT4Q643R3 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC14.54□□□□□ -0.08
LPCAT4Q643R3 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC14.54□□□□□ -0.08
LPCAT4Q643R3 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
LPCAT4Q643R3 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LPCAT4Q643R3 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
LPCAT4Q643R3 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LPCAT4Q643R3 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
LPCAT4Q643R3 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LPCAT4Q643R3 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC14.54□□□□□ -0.08
LPCAT4Q643R3 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC14.53□□□□□ -0.08
LPCAT4Q643R3 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
LPCAT4Q643R3 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LPCAT4Q643R3 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC14.53□□□□□ -0.08
LPCAT4Q643R3 HADH-202ENST00000403312 1752 ntTSL 5 BASIC14.53□□□□□ -0.08
LPCAT4Q643R3 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LPCAT4Q643R3 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LPCAT4Q643R3 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
LPCAT4Q643R3 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
LPCAT4Q643R3 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
LPCAT4Q643R3 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
LPCAT4Q643R3 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LPCAT4Q643R3 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
LPCAT4Q643R3 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LPCAT4Q643R3 AC004987.2-201ENST00000395959 1148 ntBASIC14.53□□□□□ -0.08
LPCAT4Q643R3 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC14.53□□□□□ -0.08
LPCAT4Q643R3 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC14.53□□□□□ -0.08
LPCAT4Q643R3 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC14.53□□□□□ -0.08
LPCAT4Q643R3 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC14.53□□□□□ -0.08
LPCAT4Q643R3 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC14.53□□□□□ -0.08
LPCAT4Q643R3 AC097359.3-201ENST00000603982 1210 ntBASIC14.53□□□□□ -0.08
LPCAT4Q643R3 AC025062.2-201ENST00000605477 670 ntBASIC14.53□□□□□ -0.08
LPCAT4Q643R3 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
LPCAT4Q643R3 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC14.53□□□□□ -0.08
LPCAT4Q643R3 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC14.53□□□□□ -0.08
LPCAT4Q643R3 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LPCAT4Q643R3 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
LPCAT4Q643R3 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
LPCAT4Q643R3 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
LPCAT4Q643R3 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
LPCAT4Q643R3 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
LPCAT4Q643R3 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms