Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 REXO1L5P-201ENST00000622260 2098 ntBASIC16.15■□□□□ 0.18
PTPN20Q4JDL3 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
PTPN20Q4JDL3 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
PTPN20Q4JDL3 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC16.15■□□□□ 0.18
PTPN20Q4JDL3 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PTPN20Q4JDL3 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC16.15■□□□□ 0.18
PTPN20Q4JDL3 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC16.15■□□□□ 0.18
PTPN20Q4JDL3 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PTPN20Q4JDL3 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PTPN20Q4JDL3 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PTPN20Q4JDL3 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
PTPN20Q4JDL3 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PTPN20Q4JDL3 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC16.15■□□□□ 0.18
PTPN20Q4JDL3 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PTPN20Q4JDL3 HLA-K-203ENST00000430151 1046 ntBASIC16.15■□□□□ 0.18
PTPN20Q4JDL3 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PTPN20Q4JDL3 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PTPN20Q4JDL3 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PTPN20Q4JDL3 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC16.15■□□□□ 0.18
PTPN20Q4JDL3 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
PTPN20Q4JDL3 AC138761.1-201ENST00000584393 385 ntBASIC16.15■□□□□ 0.18
PTPN20Q4JDL3 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PTPN20Q4JDL3 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
PTPN20Q4JDL3 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PTPN20Q4JDL3 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PTPN20Q4JDL3 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC16.15■□□□□ 0.18
PTPN20Q4JDL3 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PTPN20Q4JDL3 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PTPN20Q4JDL3 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PTPN20Q4JDL3 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PTPN20Q4JDL3 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
PTPN20Q4JDL3 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC16.15■□□□□ 0.18
PTPN20Q4JDL3 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PTPN20Q4JDL3 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PTPN20Q4JDL3 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PTPN20Q4JDL3 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
PTPN20Q4JDL3 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PTPN20Q4JDL3 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PTPN20Q4JDL3 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC16.14■□□□□ 0.17
PTPN20Q4JDL3 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
PTPN20Q4JDL3 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
PTPN20Q4JDL3 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PTPN20Q4JDL3 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
PTPN20Q4JDL3 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
PTPN20Q4JDL3 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
PTPN20Q4JDL3 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PTPN20Q4JDL3 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
PTPN20Q4JDL3 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PTPN20Q4JDL3 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
PTPN20Q4JDL3 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PTPN20Q4JDL3 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC16.14■□□□□ 0.17
PTPN20Q4JDL3 DGCR5-201ENST00000399539 862 ntBASIC16.14■□□□□ 0.17
PTPN20Q4JDL3 SOCS2P1-201ENST00000417727 557 ntBASIC16.14■□□□□ 0.17
PTPN20Q4JDL3 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC16.14■□□□□ 0.17
PTPN20Q4JDL3 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC16.14■□□□□ 0.17
PTPN20Q4JDL3 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC16.14■□□□□ 0.17
PTPN20Q4JDL3 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC16.14■□□□□ 0.17
PTPN20Q4JDL3 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PTPN20Q4JDL3 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PTPN20Q4JDL3 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PTPN20Q4JDL3 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC16.14■□□□□ 0.17
PTPN20Q4JDL3 AGER-206ENST00000375070 1463 ntTSL 5 BASIC16.14■□□□□ 0.17
PTPN20Q4JDL3 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PTPN20Q4JDL3 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
PTPN20Q4JDL3 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PTPN20Q4JDL3 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PTPN20Q4JDL3 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PTPN20Q4JDL3 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16.14■□□□□ 0.17
PTPN20Q4JDL3 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
PTPN20Q4JDL3 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC16.14■□□□□ 0.17
PTPN20Q4JDL3 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PTPN20Q4JDL3 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC16.14■□□□□ 0.17
PTPN20Q4JDL3 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
PTPN20Q4JDL3 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PTPN20Q4JDL3 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PTPN20Q4JDL3 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
PTPN20Q4JDL3 PES1-204ENST00000402284 2144 ntTSL 5 BASIC16.13■□□□□ 0.17
PTPN20Q4JDL3 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
PTPN20Q4JDL3 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PTPN20Q4JDL3 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC16.13■□□□□ 0.17
PTPN20Q4JDL3 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PTPN20Q4JDL3 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
PTPN20Q4JDL3 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
PTPN20Q4JDL3 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC16.13■□□□□ 0.17
PTPN20Q4JDL3 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PTPN20Q4JDL3 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PTPN20Q4JDL3 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
PTPN20Q4JDL3 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PTPN20Q4JDL3 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
PTPN20Q4JDL3 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC16.13■□□□□ 0.17
PTPN20Q4JDL3 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
PTPN20Q4JDL3 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PTPN20Q4JDL3 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC16.13■□□□□ 0.17
PTPN20Q4JDL3 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PTPN20Q4JDL3 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PTPN20Q4JDL3 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PTPN20Q4JDL3 NSL1-201ENST00000366976 722 ntTSL 2 BASIC16.13■□□□□ 0.17
PTPN20Q4JDL3 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PTPN20Q4JDL3 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PTPN20Q4JDL3 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms