Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
USH1GQ495M9 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
USH1GQ495M9 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
USH1GQ495M9 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
USH1GQ495M9 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
USH1GQ495M9 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
USH1GQ495M9 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC17.6■□□□□ 0.41
USH1GQ495M9 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
USH1GQ495M9 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
USH1GQ495M9 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC17.6■□□□□ 0.41
USH1GQ495M9 REXO1L5P-201ENST00000622260 2098 ntBASIC17.6■□□□□ 0.41
USH1GQ495M9 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
USH1GQ495M9 GSN-206ENST00000394353 2311 ntTSL 2 BASIC17.6■□□□□ 0.41
USH1GQ495M9 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
USH1GQ495M9 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
USH1GQ495M9 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
USH1GQ495M9 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC17.6■□□□□ 0.41
USH1GQ495M9 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
USH1GQ495M9 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
USH1GQ495M9 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
USH1GQ495M9 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
USH1GQ495M9 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
USH1GQ495M9 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
USH1GQ495M9 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
USH1GQ495M9 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
USH1GQ495M9 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
USH1GQ495M9 AL157414.3-201ENST00000624276 1954 ntBASIC17.59■□□□□ 0.41
USH1GQ495M9 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
USH1GQ495M9 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC17.59■□□□□ 0.41
USH1GQ495M9 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
USH1GQ495M9 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
USH1GQ495M9 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC17.59■□□□□ 0.41
USH1GQ495M9 KRT8P14-201ENST00000414254 1442 ntBASIC17.59■□□□□ 0.41
USH1GQ495M9 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
USH1GQ495M9 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
USH1GQ495M9 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
USH1GQ495M9 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
USH1GQ495M9 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC17.59■□□□□ 0.41
USH1GQ495M9 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
USH1GQ495M9 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
USH1GQ495M9 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC17.59■□□□□ 0.41
USH1GQ495M9 AHRR-211ENST00000515206 462 ntTSL 5 BASIC17.59■□□□□ 0.41
USH1GQ495M9 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC17.59■□□□□ 0.41
USH1GQ495M9 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC17.59■□□□□ 0.41
USH1GQ495M9 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC17.59■□□□□ 0.41
USH1GQ495M9 ETV2-208ENST00000621247 941 ntTSL 5 BASIC17.59■□□□□ 0.41
USH1GQ495M9 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC17.59■□□□□ 0.41
USH1GQ495M9 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC17.59■□□□□ 0.41
USH1GQ495M9 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
USH1GQ495M9 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
USH1GQ495M9 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
USH1GQ495M9 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
USH1GQ495M9 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
USH1GQ495M9 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
USH1GQ495M9 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC17.58■□□□□ 0.41
USH1GQ495M9 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC17.58■□□□□ 0.41
USH1GQ495M9 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
USH1GQ495M9 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
USH1GQ495M9 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
USH1GQ495M9 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
USH1GQ495M9 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
USH1GQ495M9 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
USH1GQ495M9 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC17.58■□□□□ 0.41
USH1GQ495M9 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC17.58■□□□□ 0.4
USH1GQ495M9 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
USH1GQ495M9 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
USH1GQ495M9 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC17.58■□□□□ 0.4
USH1GQ495M9 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
USH1GQ495M9 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC17.58■□□□□ 0.4
USH1GQ495M9 RPF1-202ENST00000370656 724 ntTSL 2 BASIC17.58■□□□□ 0.4
USH1GQ495M9 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
USH1GQ495M9 AL645937.2-201ENST00000396808 931 ntBASIC17.58■□□□□ 0.4
USH1GQ495M9 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC17.58■□□□□ 0.4
USH1GQ495M9 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC17.58■□□□□ 0.4
USH1GQ495M9 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC17.58■□□□□ 0.4
USH1GQ495M9 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC17.58■□□□□ 0.4
USH1GQ495M9 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC17.58■□□□□ 0.4
USH1GQ495M9 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC17.58■□□□□ 0.4
USH1GQ495M9 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC17.58■□□□□ 0.4
USH1GQ495M9 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
USH1GQ495M9 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
USH1GQ495M9 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
USH1GQ495M9 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC17.58■□□□□ 0.4
USH1GQ495M9 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC17.58■□□□□ 0.4
USH1GQ495M9 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC17.58■□□□□ 0.4
USH1GQ495M9 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
USH1GQ495M9 TECR-220ENST00000600083 1204 ntTSL 2 BASIC17.58■□□□□ 0.4
USH1GQ495M9 AC009542.2-202ENST00000619004 1067 ntBASIC17.58■□□□□ 0.4
USH1GQ495M9 MIR6799-201ENST00000620297 69 ntBASIC17.58■□□□□ 0.4
USH1GQ495M9 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC17.58■□□□□ 0.4
USH1GQ495M9 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
USH1GQ495M9 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
USH1GQ495M9 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
USH1GQ495M9 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
USH1GQ495M9 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
USH1GQ495M9 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
USH1GQ495M9 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
USH1GQ495M9 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
USH1GQ495M9 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
USH1GQ495M9 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms