Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SHROOM1Q2M3G4 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SHROOM1Q2M3G4 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SHROOM1Q2M3G4 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC17.76■□□□□ 0.43
SHROOM1Q2M3G4 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SHROOM1Q2M3G4 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SHROOM1Q2M3G4 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC17.76■□□□□ 0.43
SHROOM1Q2M3G4 RPL5P21-201ENST00000404620 815 ntBASIC17.76■□□□□ 0.43
SHROOM1Q2M3G4 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SHROOM1Q2M3G4 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC17.76■□□□□ 0.43
SHROOM1Q2M3G4 AC079178.1-201ENST00000420915 656 ntBASIC17.76■□□□□ 0.43
SHROOM1Q2M3G4 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SHROOM1Q2M3G4 PTPA-218ENST00000435132 618 ntTSL 2 BASIC17.76■□□□□ 0.43
SHROOM1Q2M3G4 POM121L10P-201ENST00000436994 1285 ntBASIC17.76■□□□□ 0.43
SHROOM1Q2M3G4 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC17.76■□□□□ 0.43
SHROOM1Q2M3G4 APOA2-204ENST00000464492 530 ntTSL 3 BASIC17.76■□□□□ 0.43
SHROOM1Q2M3G4 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SHROOM1Q2M3G4 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC17.76■□□□□ 0.43
SHROOM1Q2M3G4 MESTP3-201ENST00000503460 968 ntBASIC17.76■□□□□ 0.43
SHROOM1Q2M3G4 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SHROOM1Q2M3G4 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC17.76■□□□□ 0.43
SHROOM1Q2M3G4 AC244157.2-201ENST00000616239 1006 ntBASIC17.76■□□□□ 0.43
SHROOM1Q2M3G4 PPA1-206ENST00000625364 644 ntTSL 5 BASIC17.76■□□□□ 0.43
SHROOM1Q2M3G4 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SHROOM1Q2M3G4 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC17.76■□□□□ 0.43
SHROOM1Q2M3G4 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC17.76■□□□□ 0.43
SHROOM1Q2M3G4 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
SHROOM1Q2M3G4 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SHROOM1Q2M3G4 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC17.76■□□□□ 0.43
SHROOM1Q2M3G4 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
SHROOM1Q2M3G4 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SHROOM1Q2M3G4 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
SHROOM1Q2M3G4 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SHROOM1Q2M3G4 API5-202ENST00000420461 2009 ntTSL 2 BASIC17.76■□□□□ 0.43
SHROOM1Q2M3G4 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SHROOM1Q2M3G4 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
SHROOM1Q2M3G4 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SHROOM1Q2M3G4 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC17.75■□□□□ 0.43
SHROOM1Q2M3G4 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC17.75■□□□□ 0.43
SHROOM1Q2M3G4 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC17.75■□□□□ 0.43
SHROOM1Q2M3G4 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SHROOM1Q2M3G4 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SHROOM1Q2M3G4 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC17.75■□□□□ 0.43
SHROOM1Q2M3G4 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SHROOM1Q2M3G4 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
SHROOM1Q2M3G4 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SHROOM1Q2M3G4 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SHROOM1Q2M3G4 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
SHROOM1Q2M3G4 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SHROOM1Q2M3G4 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SHROOM1Q2M3G4 SLC25A24P2-201ENST00000415059 510 ntBASIC17.75■□□□□ 0.43
SHROOM1Q2M3G4 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC17.75■□□□□ 0.43
SHROOM1Q2M3G4 AC016700.1-201ENST00000429424 312 ntBASIC17.75■□□□□ 0.43
SHROOM1Q2M3G4 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SHROOM1Q2M3G4 ARTN-209ENST00000479128 471 ntTSL 3 BASIC17.75■□□□□ 0.43
SHROOM1Q2M3G4 SCARNA20.5-201ENST00000516991 142 ntBASIC17.75■□□□□ 0.43
SHROOM1Q2M3G4 RNA5SP423-201ENST00000517127 109 ntBASIC17.75■□□□□ 0.43
SHROOM1Q2M3G4 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC17.75■□□□□ 0.43
SHROOM1Q2M3G4 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC17.75■□□□□ 0.43
SHROOM1Q2M3G4 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC17.75■□□□□ 0.43
SHROOM1Q2M3G4 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC17.75■□□□□ 0.43
SHROOM1Q2M3G4 KLK11-210ENST00000600362 759 ntTSL 3 BASIC17.75■□□□□ 0.43
SHROOM1Q2M3G4 AC007663.3-201ENST00000609632 465 ntBASIC17.75■□□□□ 0.43
SHROOM1Q2M3G4 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SHROOM1Q2M3G4 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
SHROOM1Q2M3G4 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SHROOM1Q2M3G4 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC17.75■□□□□ 0.43
SHROOM1Q2M3G4 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SHROOM1Q2M3G4 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC17.75■□□□□ 0.43
SHROOM1Q2M3G4 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SHROOM1Q2M3G4 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
SHROOM1Q2M3G4 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.75■□□□□ 0.43
SHROOM1Q2M3G4 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
SHROOM1Q2M3G4 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
SHROOM1Q2M3G4 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SHROOM1Q2M3G4 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SHROOM1Q2M3G4 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
SHROOM1Q2M3G4 AC138028.6-201ENST00000616106 1482 ntBASIC17.75■□□□□ 0.43
SHROOM1Q2M3G4 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC17.75■□□□□ 0.43
SHROOM1Q2M3G4 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SHROOM1Q2M3G4 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SHROOM1Q2M3G4 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SHROOM1Q2M3G4 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SHROOM1Q2M3G4 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SHROOM1Q2M3G4 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SHROOM1Q2M3G4 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC17.74■□□□□ 0.43
SHROOM1Q2M3G4 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
SHROOM1Q2M3G4 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SHROOM1Q2M3G4 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SHROOM1Q2M3G4 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SHROOM1Q2M3G4 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SHROOM1Q2M3G4 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SHROOM1Q2M3G4 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SHROOM1Q2M3G4 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SHROOM1Q2M3G4 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SHROOM1Q2M3G4 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC17.74■□□□□ 0.43
SHROOM1Q2M3G4 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
SHROOM1Q2M3G4 AC112693.3-201ENST00000624819 1983 ntBASIC17.74■□□□□ 0.43
SHROOM1Q2M3G4 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SHROOM1Q2M3G4 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms