Protein–RNA interactions for Protein: Q16720

ATP2B3, Plasma membrane calcium-transporting ATPase 3, humanhuman

Predictions only

Length 1,220 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B3Q16720 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC18.81■□□□□ 0.6
ATP2B3Q16720 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC18.81■□□□□ 0.6
ATP2B3Q16720 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC18.81■□□□□ 0.6
ATP2B3Q16720 LARP4-220ENST00000615080 856 ntTSL 5 BASIC18.81■□□□□ 0.6
ATP2B3Q16720 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC18.81■□□□□ 0.6
ATP2B3Q16720 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
ATP2B3Q16720 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATP2B3Q16720 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ATP2B3Q16720 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC18.81■□□□□ 0.6
ATP2B3Q16720 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATP2B3Q16720 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ATP2B3Q16720 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATP2B3Q16720 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC18.81■□□□□ 0.6
ATP2B3Q16720 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC18.81■□□□□ 0.6
ATP2B3Q16720 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATP2B3Q16720 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC18.81■□□□□ 0.6
ATP2B3Q16720 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATP2B3Q16720 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATP2B3Q16720 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATP2B3Q16720 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC18.81■□□□□ 0.6
ATP2B3Q16720 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC18.81■□□□□ 0.6
ATP2B3Q16720 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC18.81■□□□□ 0.6
ATP2B3Q16720 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATP2B3Q16720 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC18.81■□□□□ 0.6
ATP2B3Q16720 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATP2B3Q16720 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATP2B3Q16720 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
ATP2B3Q16720 AC126177.1-201ENST00000547829 2218 ntBASIC18.8■□□□□ 0.6
ATP2B3Q16720 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATP2B3Q16720 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATP2B3Q16720 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ATP2B3Q16720 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATP2B3Q16720 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATP2B3Q16720 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
ATP2B3Q16720 GUK1-206ENST00000366723 845 ntTSL 5 BASIC18.8■□□□□ 0.6
ATP2B3Q16720 NME2-201ENST00000393183 568 ntTSL 2 BASIC18.8■□□□□ 0.6
ATP2B3Q16720 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC18.8■□□□□ 0.6
ATP2B3Q16720 MPV17-206ENST00000402722 827 ntTSL 3 BASIC18.8■□□□□ 0.6
ATP2B3Q16720 CNN2P8-201ENST00000421872 913 ntBASIC18.8■□□□□ 0.6
ATP2B3Q16720 HLA-V-201ENST00000429037 534 ntBASIC18.8■□□□□ 0.6
ATP2B3Q16720 CSF2RBP1-201ENST00000447905 391 ntBASIC18.8■□□□□ 0.6
ATP2B3Q16720 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ATP2B3Q16720 RHOXF1P1-202ENST00000635473 501 ntBASIC18.8■□□□□ 0.6
ATP2B3Q16720 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATP2B3Q16720 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATP2B3Q16720 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC18.8■□□□□ 0.6
ATP2B3Q16720 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATP2B3Q16720 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC18.8■□□□□ 0.6
ATP2B3Q16720 FOS-202ENST00000535987 1402 ntTSL 2 BASIC18.8■□□□□ 0.6
ATP2B3Q16720 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATP2B3Q16720 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ATP2B3Q16720 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC18.8■□□□□ 0.6
ATP2B3Q16720 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATP2B3Q16720 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATP2B3Q16720 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ATP2B3Q16720 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATP2B3Q16720 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATP2B3Q16720 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ATP2B3Q16720 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATP2B3Q16720 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC18.79■□□□□ 0.6
ATP2B3Q16720 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATP2B3Q16720 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
ATP2B3Q16720 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATP2B3Q16720 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
ATP2B3Q16720 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
ATP2B3Q16720 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ATP2B3Q16720 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATP2B3Q16720 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATP2B3Q16720 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
ATP2B3Q16720 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC18.79■□□□□ 0.6
ATP2B3Q16720 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATP2B3Q16720 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATP2B3Q16720 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ATP2B3Q16720 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATP2B3Q16720 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATP2B3Q16720 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATP2B3Q16720 ING5-213ENST00000636051 4199 ntTSL 5 BASIC18.79■□□□□ 0.6
ATP2B3Q16720 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC18.79■□□□□ 0.6
ATP2B3Q16720 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ATP2B3Q16720 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATP2B3Q16720 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATP2B3Q16720 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATP2B3Q16720 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATP2B3Q16720 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATP2B3Q16720 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC18.79■□□□□ 0.6
ATP2B3Q16720 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ATP2B3Q16720 AC026954.1-201ENST00000429771 1293 ntBASIC18.79■□□□□ 0.6
ATP2B3Q16720 FAM197Y7-201ENST00000432892 766 ntBASIC18.79■□□□□ 0.6
ATP2B3Q16720 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC18.79■□□□□ 0.6
ATP2B3Q16720 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC18.79■□□□□ 0.6
ATP2B3Q16720 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC18.79■□□□□ 0.6
ATP2B3Q16720 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC18.79■□□□□ 0.6
ATP2B3Q16720 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC18.79■□□□□ 0.6
ATP2B3Q16720 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC18.79■□□□□ 0.6
ATP2B3Q16720 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC18.79■□□□□ 0.6
ATP2B3Q16720 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC18.79■□□□□ 0.6
ATP2B3Q16720 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
ATP2B3Q16720 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC18.79■□□□□ 0.6
ATP2B3Q16720 AL033527.4-201ENST00000641026 673 ntBASIC18.79■□□□□ 0.6
ATP2B3Q16720 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms