Protein–RNA interactions for Protein: Q0VF96

CGNL1, Cingulin-like protein 1, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGNL1Q0VF96 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
CGNL1Q0VF96 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CGNL1Q0VF96 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CGNL1Q0VF96 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
CGNL1Q0VF96 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CGNL1Q0VF96 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CGNL1Q0VF96 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CGNL1Q0VF96 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CGNL1Q0VF96 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CGNL1Q0VF96 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CGNL1Q0VF96 MIR1202-201ENST00000408529 83 ntBASIC20.73■□□□□ 0.91
CGNL1Q0VF96 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CGNL1Q0VF96 OLR1-203ENST00000432556 950 ntTSL 2 BASIC20.73■□□□□ 0.91
CGNL1Q0VF96 PFN2-215ENST00000497148 743 ntTSL 4 BASIC20.73■□□□□ 0.91
CGNL1Q0VF96 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC20.73■□□□□ 0.91
CGNL1Q0VF96 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
CGNL1Q0VF96 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CGNL1Q0VF96 AC244093.1-201ENST00000610837 814 ntBASIC20.73■□□□□ 0.91
CGNL1Q0VF96 AC009542.2-202ENST00000619004 1067 ntBASIC20.73■□□□□ 0.91
CGNL1Q0VF96 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC20.73■□□□□ 0.91
CGNL1Q0VF96 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC20.73■□□□□ 0.91
CGNL1Q0VF96 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC20.73■□□□□ 0.91
CGNL1Q0VF96 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CGNL1Q0VF96 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CGNL1Q0VF96 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC20.73■□□□□ 0.91
CGNL1Q0VF96 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
CGNL1Q0VF96 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CGNL1Q0VF96 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC20.72■□□□□ 0.91
CGNL1Q0VF96 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
CGNL1Q0VF96 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC20.72■□□□□ 0.91
CGNL1Q0VF96 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
CGNL1Q0VF96 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CGNL1Q0VF96 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CGNL1Q0VF96 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CGNL1Q0VF96 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
CGNL1Q0VF96 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC20.72■□□□□ 0.91
CGNL1Q0VF96 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CGNL1Q0VF96 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
CGNL1Q0VF96 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
CGNL1Q0VF96 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC20.72■□□□□ 0.91
CGNL1Q0VF96 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
CGNL1Q0VF96 AC084346.2-201ENST00000607097 949 ntBASIC20.72■□□□□ 0.91
CGNL1Q0VF96 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CGNL1Q0VF96 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CGNL1Q0VF96 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CGNL1Q0VF96 AC023024.2-201ENST00000623561 1993 ntBASIC20.72■□□□□ 0.91
CGNL1Q0VF96 AL359258.3-201ENST00000622910 2331 ntBASIC20.72■□□□□ 0.91
CGNL1Q0VF96 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC20.72■□□□□ 0.91
CGNL1Q0VF96 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
CGNL1Q0VF96 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
CGNL1Q0VF96 LCK-206ENST00000373564 2137 ntTSL 5 BASIC20.72■□□□□ 0.91
CGNL1Q0VF96 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CGNL1Q0VF96 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC20.71■□□□□ 0.91
CGNL1Q0VF96 AC092384.3-202ENST00000564646 2873 ntBASIC20.71■□□□□ 0.91
CGNL1Q0VF96 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CGNL1Q0VF96 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CGNL1Q0VF96 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CGNL1Q0VF96 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
CGNL1Q0VF96 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
CGNL1Q0VF96 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC20.71■□□□□ 0.91
CGNL1Q0VF96 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
CGNL1Q0VF96 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CGNL1Q0VF96 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CGNL1Q0VF96 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC20.71■□□□□ 0.91
CGNL1Q0VF96 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CGNL1Q0VF96 PES1-204ENST00000402284 2144 ntTSL 5 BASIC20.71■□□□□ 0.91
CGNL1Q0VF96 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CGNL1Q0VF96 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC20.71■□□□□ 0.91
CGNL1Q0VF96 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC20.71■□□□□ 0.91
CGNL1Q0VF96 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CGNL1Q0VF96 AL354989.2-201ENST00000435838 1540 ntBASIC20.71■□□□□ 0.91
CGNL1Q0VF96 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC20.71■□□□□ 0.91
CGNL1Q0VF96 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CGNL1Q0VF96 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC20.71■□□□□ 0.91
CGNL1Q0VF96 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CGNL1Q0VF96 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC20.71■□□□□ 0.91
CGNL1Q0VF96 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CGNL1Q0VF96 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC20.71■□□□□ 0.91
CGNL1Q0VF96 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC20.71■□□□□ 0.91
CGNL1Q0VF96 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CGNL1Q0VF96 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC20.71■□□□□ 0.91
CGNL1Q0VF96 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CGNL1Q0VF96 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
CGNL1Q0VF96 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
CGNL1Q0VF96 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
CGNL1Q0VF96 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CGNL1Q0VF96 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC20.7■□□□□ 0.9
CGNL1Q0VF96 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC20.7■□□□□ 0.9
CGNL1Q0VF96 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CGNL1Q0VF96 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC20.7■□□□□ 0.9
CGNL1Q0VF96 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CGNL1Q0VF96 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC20.7■□□□□ 0.9
CGNL1Q0VF96 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CGNL1Q0VF96 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CGNL1Q0VF96 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC20.7■□□□□ 0.9
CGNL1Q0VF96 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CGNL1Q0VF96 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC20.7■□□□□ 0.9
CGNL1Q0VF96 BCYRN1-201ENST00000418539 200 ntBASIC20.7■□□□□ 0.9
CGNL1Q0VF96 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CGNL1Q0VF96 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms