Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
COL16A1Q07092 OPN1SW-201ENST00000249389 1096 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
COL16A1Q07092 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
COL16A1Q07092 ATP5J-202ENST00000400087 826 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
COL16A1Q07092 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC19.98■□□□□ 0.79
COL16A1Q07092 WNT5A-205ENST00000497027 1299 ntTSL 2 BASIC19.98■□□□□ 0.79
COL16A1Q07092 AL121796.1-201ENST00000505702 466 ntTSL 3 BASIC19.98■□□□□ 0.79
COL16A1Q07092 CHTF8-207ENST00000520529 475 ntTSL 2 BASIC19.98■□□□□ 0.79
COL16A1Q07092 AC092862.1-201ENST00000541534 533 ntBASIC19.98■□□□□ 0.79
COL16A1Q07092 MYL6-218ENST00000550697 901 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
COL16A1Q07092 AC003686.1-201ENST00000550956 1034 ntBASIC19.98■□□□□ 0.79
COL16A1Q07092 AC005154.1-232ENST00000582549 556 ntTSL 5 BASIC19.98■□□□□ 0.79
COL16A1Q07092 SIGLEC22P-201ENST00000599104 714 ntBASIC19.98■□□□□ 0.79
COL16A1Q07092 LINC02333-201ENST00000603464 852 ntTSL 3 BASIC19.98■□□□□ 0.79
COL16A1Q07092 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC19.98■□□□□ 0.79
COL16A1Q07092 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
COL16A1Q07092 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
COL16A1Q07092 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
COL16A1Q07092 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.97■□□□□ 0.79
COL16A1Q07092 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
COL16A1Q07092 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
COL16A1Q07092 FTX-216ENST00000638985 1367 ntTSL 5 BASIC19.97■□□□□ 0.79
COL16A1Q07092 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
COL16A1Q07092 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC19.97■□□□□ 0.79
COL16A1Q07092 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
COL16A1Q07092 TRAPPC3-201ENST00000373159 590 ntTSL 3 BASIC19.97■□□□□ 0.79
COL16A1Q07092 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC19.97■□□□□ 0.79
COL16A1Q07092 MT2A-202ENST00000561491 581 ntTSL 2 BASIC19.97■□□□□ 0.79
COL16A1Q07092 AC012617.1-201ENST00000586345 797 ntTSL 2 BASIC19.97■□□□□ 0.79
COL16A1Q07092 CCDC113-206ENST00000616795 891 ntTSL 5 BASIC19.97■□□□□ 0.79
COL16A1Q07092 ST5-261ENST00000626808 1071 ntTSL 5 BASIC19.97■□□□□ 0.79
COL16A1Q07092 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
COL16A1Q07092 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
COL16A1Q07092 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
COL16A1Q07092 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
COL16A1Q07092 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC19.97■□□□□ 0.79
COL16A1Q07092 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
COL16A1Q07092 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
COL16A1Q07092 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
COL16A1Q07092 LINC01022-201ENST00000415652 394 ntTSL 3 BASIC19.96■□□□□ 0.79
COL16A1Q07092 CCDC12-202ENST00000425441 1097 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
COL16A1Q07092 AL512622.1-202ENST00000443922 478 ntTSL 3 BASIC19.96■□□□□ 0.79
COL16A1Q07092 AC010900.1-201ENST00000449849 1296 ntBASIC19.96■□□□□ 0.79
COL16A1Q07092 AC128689.1-202ENST00000459861 827 ntTSL 3 BASIC19.96■□□□□ 0.79
COL16A1Q07092 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC19.96■□□□□ 0.79
COL16A1Q07092 AC138409.2-203ENST00000508395 553 ntTSL 4 BASIC19.96■□□□□ 0.79
COL16A1Q07092 AC009065.6-201ENST00000568795 456 ntTSL 2 BASIC19.96■□□□□ 0.79
COL16A1Q07092 RBFOX3-206ENST00000582043 1143 ntTSL 5 BASIC19.96■□□□□ 0.79
COL16A1Q07092 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC19.96■□□□□ 0.79
COL16A1Q07092 AP000357.2-201ENST00000633827 597 ntTSL 2 BASIC19.96■□□□□ 0.79
COL16A1Q07092 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC19.96■□□□□ 0.79
COL16A1Q07092 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
COL16A1Q07092 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
COL16A1Q07092 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COL16A1Q07092 WIPI1-201ENST00000262139 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COL16A1Q07092 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COL16A1Q07092 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COL16A1Q07092 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
COL16A1Q07092 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC19.96■□□□□ 0.79
COL16A1Q07092 F10-201ENST00000375551 1509 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
COL16A1Q07092 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
COL16A1Q07092 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
COL16A1Q07092 TRBV5-7-201ENST00000390378 343 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
COL16A1Q07092 IGHV5-51-201ENST00000390626 410 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
COL16A1Q07092 PRAME-206ENST00000406503 740 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
COL16A1Q07092 RPL18AP8-201ENST00000486071 528 ntBASIC19.95■□□□□ 0.78
COL16A1Q07092 IGHEP2-201ENST00000519308 1256 ntBASIC19.95■□□□□ 0.78
COL16A1Q07092 CTBP2P6-201ENST00000526402 1229 ntBASIC19.95■□□□□ 0.78
COL16A1Q07092 C11orf1-202ENST00000528125 534 ntTSL 2 BASIC19.95■□□□□ 0.78
COL16A1Q07092 KRT8P1-201ENST00000557533 1207 ntBASIC19.95■□□□□ 0.78
COL16A1Q07092 VPS18-202ENST00000558474 873 ntTSL 3 BASIC19.95■□□□□ 0.78
COL16A1Q07092 AC013553.1-201ENST00000560906 267 ntBASIC19.95■□□□□ 0.78
COL16A1Q07092 ZNF175-204ENST00000596504 580 ntTSL 2 BASIC19.95■□□□□ 0.78
COL16A1Q07092 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
COL16A1Q07092 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
COL16A1Q07092 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COL16A1Q07092 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC19.95■□□□□ 0.78
COL16A1Q07092 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COL16A1Q07092 WASH7P-201ENST00000488147 1351 ntBASIC19.95■□□□□ 0.78
COL16A1Q07092 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COL16A1Q07092 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COL16A1Q07092 AC007292.2-201ENST00000593524 1812 ntBASIC19.95■□□□□ 0.78
COL16A1Q07092 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
COL16A1Q07092 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
COL16A1Q07092 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC19.95■□□□□ 0.78
COL16A1Q07092 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
COL16A1Q07092 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC19.94■□□□□ 0.78
COL16A1Q07092 RN7SL277P-201ENST00000481521 288 ntBASIC19.94■□□□□ 0.78
COL16A1Q07092 IGHV1-12-201ENST00000518307 205 ntBASIC19.94■□□□□ 0.78
COL16A1Q07092 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC19.94■□□□□ 0.78
COL16A1Q07092 APOC4-202ENST00000592954 615 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
COL16A1Q07092 AC020904.3-201ENST00000624199 442 ntBASIC19.94■□□□□ 0.78
COL16A1Q07092 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC19.94■□□□□ 0.78
COL16A1Q07092 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
COL16A1Q07092 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
COL16A1Q07092 SERPINA1-209ENST00000449399 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
COL16A1Q07092 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC19.94■□□□□ 0.78
COL16A1Q07092 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
COL16A1Q07092 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
COL16A1Q07092 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms