Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
GABREP78334 SDHD-202ENST00000525291 790 ntTSL 3 BASIC14.58□□□□□ -0.08
GABREP78334 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC14.58□□□□□ -0.08
GABREP78334 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC14.58□□□□□ -0.08
GABREP78334 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC14.58□□□□□ -0.08
GABREP78334 AC025181.2-201ENST00000606994 802 ntBASIC14.58□□□□□ -0.08
GABREP78334 AC091544.8-201ENST00000619490 361 ntBASIC14.58□□□□□ -0.08
GABREP78334 AC128714.1-201ENST00000637035 887 ntBASIC14.58□□□□□ -0.08
GABREP78334 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
GABREP78334 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
GABREP78334 AMT-224ENST00000635808 1610 ntTSL 5 BASIC14.58□□□□□ -0.08
GABREP78334 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
GABREP78334 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
GABREP78334 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
GABREP78334 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
GABREP78334 AC046158.3-201ENST00000624947 2558 ntBASIC14.58□□□□□ -0.08
GABREP78334 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
GABREP78334 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
GABREP78334 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC14.58□□□□□ -0.08
GABREP78334 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
GABREP78334 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
GABREP78334 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
GABREP78334 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
GABREP78334 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
GABREP78334 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
GABREP78334 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC14.57□□□□□ -0.08
GABREP78334 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
GABREP78334 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
GABREP78334 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
GABREP78334 FLJ16779-201ENST00000612722 7638 ntBASIC14.57□□□□□ -0.08
GABREP78334 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
GABREP78334 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
GABREP78334 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC14.57□□□□□ -0.08
GABREP78334 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC14.57□□□□□ -0.08
GABREP78334 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC14.57□□□□□ -0.08
GABREP78334 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
GABREP78334 ANKRD30BP2-201ENST00000435744 1610 ntBASIC14.57□□□□□ -0.08
GABREP78334 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
GABREP78334 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
GABREP78334 AC091046.1-201ENST00000331871 207 ntBASIC14.57□□□□□ -0.08
GABREP78334 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
GABREP78334 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
GABREP78334 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
GABREP78334 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC14.57□□□□□ -0.08
GABREP78334 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC14.57□□□□□ -0.08
GABREP78334 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC14.57□□□□□ -0.08
GABREP78334 RPS2P36-201ENST00000456516 831 ntBASIC14.57□□□□□ -0.08
GABREP78334 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
GABREP78334 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC14.57□□□□□ -0.08
GABREP78334 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC14.57□□□□□ -0.08
GABREP78334 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC14.57□□□□□ -0.08
GABREP78334 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC14.57□□□□□ -0.08
GABREP78334 EHF-205ENST00000527935 557 ntTSL 2 BASIC14.57□□□□□ -0.08
GABREP78334 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC14.57□□□□□ -0.08
GABREP78334 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
GABREP78334 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC14.57□□□□□ -0.08
GABREP78334 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
GABREP78334 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
GABREP78334 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
GABREP78334 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
GABREP78334 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
GABREP78334 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC14.57□□□□□ -0.08
GABREP78334 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
GABREP78334 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
GABREP78334 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
GABREP78334 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
GABREP78334 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
GABREP78334 PCDHA1-201ENST00000378133 2726 ntBASIC14.57□□□□□ -0.08
GABREP78334 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
GABREP78334 FLII-221ENST00000578558 2377 ntTSL 5 BASIC14.56□□□□□ -0.08
GABREP78334 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
GABREP78334 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
GABREP78334 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
GABREP78334 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC14.56□□□□□ -0.08
GABREP78334 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC14.56□□□□□ -0.08
GABREP78334 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
GABREP78334 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
GABREP78334 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
GABREP78334 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
GABREP78334 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC14.56□□□□□ -0.08
GABREP78334 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
GABREP78334 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC14.56□□□□□ -0.08
GABREP78334 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
GABREP78334 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC14.56□□□□□ -0.08
GABREP78334 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC14.56□□□□□ -0.08
GABREP78334 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC14.56□□□□□ -0.08
GABREP78334 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC14.56□□□□□ -0.08
GABREP78334 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
GABREP78334 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC14.56□□□□□ -0.08
GABREP78334 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
GABREP78334 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC14.56□□□□□ -0.08
GABREP78334 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC14.56□□□□□ -0.08
GABREP78334 FGFR3P5-201ENST00000564496 886 ntBASIC14.56□□□□□ -0.08
GABREP78334 NAT9-224ENST00000583757 583 ntTSL 3 BASIC14.56□□□□□ -0.08
GABREP78334 OR10B1P-201ENST00000601666 907 ntBASIC14.56□□□□□ -0.08
GABREP78334 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC14.56□□□□□ -0.08
GABREP78334 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
GABREP78334 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
GABREP78334 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
GABREP78334 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms