Protein–RNA interactions for Protein: P61129

ZC3H6, Zinc finger CCCH domain-containing protein 6, humanhuman

Known RBP Predictions only

Length 1,189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H6P61129 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ZC3H6P61129 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ZC3H6P61129 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
ZC3H6P61129 NKILA-202ENST00000614771 2598 ntBASIC20.25■□□□□ 0.83
ZC3H6P61129 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ZC3H6P61129 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ZC3H6P61129 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC20.24■□□□□ 0.83
ZC3H6P61129 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC20.24■□□□□ 0.83
ZC3H6P61129 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZC3H6P61129 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZC3H6P61129 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZC3H6P61129 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZC3H6P61129 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC20.24■□□□□ 0.83
ZC3H6P61129 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC20.24■□□□□ 0.83
ZC3H6P61129 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ZC3H6P61129 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC20.24■□□□□ 0.83
ZC3H6P61129 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZC3H6P61129 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZC3H6P61129 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZC3H6P61129 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC20.24■□□□□ 0.83
ZC3H6P61129 AC010141.1-201ENST00000411585 623 ntBASIC20.24■□□□□ 0.83
ZC3H6P61129 RPSAP31-201ENST00000416648 895 ntBASIC20.24■□□□□ 0.83
ZC3H6P61129 RPL13AP19-201ENST00000434320 584 ntBASIC20.24■□□□□ 0.83
ZC3H6P61129 AC078991.1-201ENST00000437297 610 ntBASIC20.24■□□□□ 0.83
ZC3H6P61129 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
ZC3H6P61129 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC20.24■□□□□ 0.83
ZC3H6P61129 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC20.24■□□□□ 0.83
ZC3H6P61129 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
ZC3H6P61129 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC20.24■□□□□ 0.83
ZC3H6P61129 AC026471.1-201ENST00000564629 3026 ntBASIC20.24■□□□□ 0.83
ZC3H6P61129 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZC3H6P61129 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC20.24■□□□□ 0.83
ZC3H6P61129 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZC3H6P61129 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZC3H6P61129 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZC3H6P61129 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
ZC3H6P61129 AL360270.3-201ENST00000609118 1348 ntBASIC20.24■□□□□ 0.83
ZC3H6P61129 AL359258.3-201ENST00000622910 2331 ntBASIC20.24■□□□□ 0.83
ZC3H6P61129 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC20.24■□□□□ 0.83
ZC3H6P61129 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ZC3H6P61129 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC20.23■□□□□ 0.83
ZC3H6P61129 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ZC3H6P61129 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
ZC3H6P61129 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC20.23■□□□□ 0.83
ZC3H6P61129 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC20.23■□□□□ 0.83
ZC3H6P61129 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ZC3H6P61129 SUPT20HL2-201ENST00000486479 2409 ntBASIC20.23■□□□□ 0.83
ZC3H6P61129 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
ZC3H6P61129 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
ZC3H6P61129 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ZC3H6P61129 RN7SL818P-201ENST00000485099 259 ntBASIC20.23■□□□□ 0.83
ZC3H6P61129 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ZC3H6P61129 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC20.23■□□□□ 0.83
ZC3H6P61129 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC20.23■□□□□ 0.83
ZC3H6P61129 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
ZC3H6P61129 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ZC3H6P61129 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC20.23■□□□□ 0.83
ZC3H6P61129 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
ZC3H6P61129 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
ZC3H6P61129 RN7SL725P-201ENST00000606439 259 ntBASIC20.23■□□□□ 0.83
ZC3H6P61129 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC20.23■□□□□ 0.83
ZC3H6P61129 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ZC3H6P61129 SLC9A7P1-202ENST00000556476 2239 ntBASIC20.23■□□□□ 0.83
ZC3H6P61129 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ZC3H6P61129 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
ZC3H6P61129 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ZC3H6P61129 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ZC3H6P61129 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC20.23■□□□□ 0.83
ZC3H6P61129 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ZC3H6P61129 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC20.23■□□□□ 0.83
ZC3H6P61129 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ZC3H6P61129 AC244394.1-201ENST00000435000 1665 ntBASIC20.22■□□□□ 0.83
ZC3H6P61129 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ZC3H6P61129 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ZC3H6P61129 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
ZC3H6P61129 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC20.22■□□□□ 0.83
ZC3H6P61129 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ZC3H6P61129 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ZC3H6P61129 AL137783.1-201ENST00000623494 1896 ntBASIC20.22■□□□□ 0.83
ZC3H6P61129 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ZC3H6P61129 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC20.22■□□□□ 0.83
ZC3H6P61129 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ZC3H6P61129 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
ZC3H6P61129 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC20.22■□□□□ 0.83
ZC3H6P61129 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC20.22■□□□□ 0.83
ZC3H6P61129 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
ZC3H6P61129 AMT-239ENST00000636865 1914 ntTSL 5 BASIC20.22■□□□□ 0.83
ZC3H6P61129 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC20.22■□□□□ 0.83
ZC3H6P61129 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ZC3H6P61129 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
ZC3H6P61129 OR2K2-202ENST00000374428 1038 ntBASIC20.22■□□□□ 0.83
ZC3H6P61129 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
ZC3H6P61129 AL627231.1-201ENST00000394467 1125 ntBASIC20.22■□□□□ 0.83
ZC3H6P61129 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
ZC3H6P61129 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC20.22■□□□□ 0.83
ZC3H6P61129 CDC23-208ENST00000505120 455 ntTSL 3 BASIC20.22■□□□□ 0.83
ZC3H6P61129 SCARNA21-201ENST00000517026 139 ntBASIC20.22■□□□□ 0.83
ZC3H6P61129 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ZC3H6P61129 AC138696.2-201ENST00000607376 223 ntBASIC20.22■□□□□ 0.83
ZC3H6P61129 MIR6842-201ENST00000612539 65 ntBASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms