Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CXCR4P61073 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC14.05□□□□□ -0.16
CXCR4P61073 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
CXCR4P61073 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CXCR4P61073 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CXCR4P61073 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CXCR4P61073 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CXCR4P61073 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CXCR4P61073 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC14.05□□□□□ -0.16
CXCR4P61073 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC14.05□□□□□ -0.16
CXCR4P61073 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC14.05□□□□□ -0.16
CXCR4P61073 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC14.05□□□□□ -0.16
CXCR4P61073 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CXCR4P61073 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CXCR4P61073 AL513190.1-201ENST00000621254 727 ntBASIC14.05□□□□□ -0.16
CXCR4P61073 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
CXCR4P61073 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
CXCR4P61073 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC14.05□□□□□ -0.16
CXCR4P61073 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CXCR4P61073 KCP-203ENST00000610776 5108 ntTSL 5 BASIC14.05□□□□□ -0.16
CXCR4P61073 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CXCR4P61073 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
CXCR4P61073 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CXCR4P61073 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC14.05□□□□□ -0.16
CXCR4P61073 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CXCR4P61073 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CXCR4P61073 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CXCR4P61073 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CXCR4P61073 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC14.05□□□□□ -0.16
CXCR4P61073 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CXCR4P61073 AC023090.2-201ENST00000625182 2110 ntBASIC14.05□□□□□ -0.16
CXCR4P61073 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CXCR4P61073 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CXCR4P61073 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CXCR4P61073 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CXCR4P61073 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CXCR4P61073 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CXCR4P61073 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CXCR4P61073 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CXCR4P61073 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
CXCR4P61073 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CXCR4P61073 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC14.04□□□□□ -0.16
CXCR4P61073 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC14.04□□□□□ -0.16
CXCR4P61073 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CXCR4P61073 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CXCR4P61073 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CXCR4P61073 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CXCR4P61073 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
CXCR4P61073 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CXCR4P61073 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
CXCR4P61073 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CXCR4P61073 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC14.04□□□□□ -0.16
CXCR4P61073 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
CXCR4P61073 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC14.04□□□□□ -0.16
CXCR4P61073 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
CXCR4P61073 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CXCR4P61073 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
CXCR4P61073 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
CXCR4P61073 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC14.04□□□□□ -0.16
CXCR4P61073 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CXCR4P61073 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC14.04□□□□□ -0.16
CXCR4P61073 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC14.04□□□□□ -0.16
CXCR4P61073 PP14571-201ENST00000404327 934 ntTSL 2 BASIC14.04□□□□□ -0.16
CXCR4P61073 AL139010.1-201ENST00000454878 894 ntBASIC14.04□□□□□ -0.16
CXCR4P61073 AC009078.2-202ENST00000463353 338 ntBASIC14.04□□□□□ -0.16
CXCR4P61073 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC14.04□□□□□ -0.16
CXCR4P61073 PP7080-204ENST00000510714 601 ntTSL 3 BASIC14.04□□□□□ -0.16
CXCR4P61073 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
CXCR4P61073 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC14.04□□□□□ -0.16
CXCR4P61073 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC14.04□□□□□ -0.16
CXCR4P61073 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC14.04□□□□□ -0.16
CXCR4P61073 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC14.04□□□□□ -0.16
CXCR4P61073 AC027307.2-201ENST00000591252 911 ntBASIC14.04□□□□□ -0.16
CXCR4P61073 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CXCR4P61073 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC14.04□□□□□ -0.16
CXCR4P61073 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC14.04□□□□□ -0.16
CXCR4P61073 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC14.04□□□□□ -0.16
CXCR4P61073 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC14.04□□□□□ -0.16
CXCR4P61073 AC008267.7-201ENST00000624570 1194 ntBASIC14.04□□□□□ -0.16
CXCR4P61073 AKAP8P1-201ENST00000434743 1349 ntBASIC14.04□□□□□ -0.16
CXCR4P61073 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CXCR4P61073 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.04□□□□□ -0.16
CXCR4P61073 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC14.04□□□□□ -0.16
CXCR4P61073 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC14.04□□□□□ -0.16
CXCR4P61073 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CXCR4P61073 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CXCR4P61073 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
CXCR4P61073 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CXCR4P61073 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CXCR4P61073 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CXCR4P61073 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CXCR4P61073 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CXCR4P61073 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CXCR4P61073 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CXCR4P61073 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
CXCR4P61073 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CXCR4P61073 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CXCR4P61073 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC14.03□□□□□ -0.16
CXCR4P61073 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CXCR4P61073 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms