Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CDC42P60953 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
CDC42P60953 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CDC42P60953 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CDC42P60953 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC14.13□□□□□ -0.15
CDC42P60953 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CDC42P60953 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC14.13□□□□□ -0.15
CDC42P60953 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CDC42P60953 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC14.13□□□□□ -0.15
CDC42P60953 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CDC42P60953 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CDC42P60953 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CDC42P60953 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CDC42P60953 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CDC42P60953 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC14.13□□□□□ -0.15
CDC42P60953 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
CDC42P60953 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
CDC42P60953 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDC42P60953 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDC42P60953 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CDC42P60953 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC14.12□□□□□ -0.15
CDC42P60953 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC14.12□□□□□ -0.15
CDC42P60953 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDC42P60953 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDC42P60953 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CDC42P60953 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDC42P60953 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC14.12□□□□□ -0.15
CDC42P60953 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDC42P60953 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CDC42P60953 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDC42P60953 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CDC42P60953 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CDC42P60953 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDC42P60953 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC14.12□□□□□ -0.15
CDC42P60953 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CDC42P60953 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
CDC42P60953 KLK8-202ENST00000320838 456 ntTSL 5 BASIC14.12□□□□□ -0.15
CDC42P60953 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC14.12□□□□□ -0.15
CDC42P60953 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
CDC42P60953 HLA-H-201ENST00000383620 1096 ntBASIC14.12□□□□□ -0.15
CDC42P60953 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC14.12□□□□□ -0.15
CDC42P60953 AC142381.1-201ENST00000426099 345 ntBASIC14.12□□□□□ -0.15
CDC42P60953 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC14.12□□□□□ -0.15
CDC42P60953 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC14.12□□□□□ -0.15
CDC42P60953 FXR1-221ENST00000491674 365 ntTSL 2 BASIC14.12□□□□□ -0.15
CDC42P60953 AC093909.1-201ENST00000504731 1122 ntBASIC14.12□□□□□ -0.15
CDC42P60953 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CDC42P60953 AC079776.4-201ENST00000511039 504 ntBASIC14.12□□□□□ -0.15
CDC42P60953 MAL2-202ENST00000531508 892 ntTSL 3 BASIC14.12□□□□□ -0.15
CDC42P60953 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC14.12□□□□□ -0.15
CDC42P60953 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDC42P60953 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC14.12□□□□□ -0.15
CDC42P60953 SPIB-207ENST00000597855 564 ntTSL 4 BASIC14.12□□□□□ -0.15
CDC42P60953 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CDC42P60953 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC14.12□□□□□ -0.15
CDC42P60953 AC116407.3-201ENST00000623905 1129 ntBASIC14.12□□□□□ -0.15
CDC42P60953 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC14.12□□□□□ -0.15
CDC42P60953 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDC42P60953 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC14.12□□□□□ -0.15
CDC42P60953 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC14.12□□□□□ -0.15
CDC42P60953 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDC42P60953 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
CDC42P60953 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC14.12□□□□□ -0.15
CDC42P60953 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
CDC42P60953 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC14.12□□□□□ -0.15
CDC42P60953 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC14.12□□□□□ -0.15
CDC42P60953 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
CDC42P60953 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC14.12□□□□□ -0.15
CDC42P60953 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC14.12□□□□□ -0.15
CDC42P60953 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
CDC42P60953 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
CDC42P60953 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
CDC42P60953 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDC42P60953 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC14.12□□□□□ -0.15
CDC42P60953 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CDC42P60953 AC018529.2-202ENST00000611482 3087 ntBASIC14.11□□□□□ -0.15
CDC42P60953 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC14.11□□□□□ -0.15
CDC42P60953 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDC42P60953 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
CDC42P60953 AC097359.2-201ENST00000604992 2389 ntBASIC14.11□□□□□ -0.15
CDC42P60953 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDC42P60953 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CDC42P60953 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC14.11□□□□□ -0.15
CDC42P60953 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDC42P60953 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDC42P60953 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
CDC42P60953 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC14.11□□□□□ -0.15
CDC42P60953 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDC42P60953 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC14.11□□□□□ -0.15
CDC42P60953 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDC42P60953 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDC42P60953 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
CDC42P60953 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDC42P60953 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CDC42P60953 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC14.11□□□□□ -0.15
CDC42P60953 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDC42P60953 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDC42P60953 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC14.11□□□□□ -0.15
CDC42P60953 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC14.11□□□□□ -0.15
CDC42P60953 AL031284.1-201ENST00000419297 478 ntBASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms