Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHMP4BP1P59074 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHMP4BP1P59074 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CHMP4BP1P59074 AC018892.3-201ENST00000623986 2499 ntBASIC17.65■□□□□ 0.42
CHMP4BP1P59074 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHMP4BP1P59074 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHMP4BP1P59074 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
CHMP4BP1P59074 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC17.65■□□□□ 0.42
CHMP4BP1P59074 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC17.65■□□□□ 0.42
CHMP4BP1P59074 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHMP4BP1P59074 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHMP4BP1P59074 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CHMP4BP1P59074 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC17.65■□□□□ 0.42
CHMP4BP1P59074 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC17.65■□□□□ 0.42
CHMP4BP1P59074 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC17.65■□□□□ 0.42
CHMP4BP1P59074 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHMP4BP1P59074 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CHMP4BP1P59074 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.42
CHMP4BP1P59074 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC17.64■□□□□ 0.42
CHMP4BP1P59074 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CHMP4BP1P59074 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC17.64■□□□□ 0.42
CHMP4BP1P59074 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CHMP4BP1P59074 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHMP4BP1P59074 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CHMP4BP1P59074 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC17.64■□□□□ 0.41
CHMP4BP1P59074 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC17.64■□□□□ 0.41
CHMP4BP1P59074 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CHMP4BP1P59074 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CHMP4BP1P59074 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CHMP4BP1P59074 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC17.64■□□□□ 0.41
CHMP4BP1P59074 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CHMP4BP1P59074 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHMP4BP1P59074 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHMP4BP1P59074 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC17.64■□□□□ 0.41
CHMP4BP1P59074 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHMP4BP1P59074 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC17.64■□□□□ 0.41
CHMP4BP1P59074 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC17.64■□□□□ 0.41
CHMP4BP1P59074 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHMP4BP1P59074 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHMP4BP1P59074 RPF1-202ENST00000370656 724 ntTSL 2 BASIC17.64■□□□□ 0.41
CHMP4BP1P59074 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHMP4BP1P59074 BOLA2P3-201ENST00000404566 256 ntBASIC17.64■□□□□ 0.41
CHMP4BP1P59074 HAUS4P1-201ENST00000406739 1145 ntBASIC17.64■□□□□ 0.41
CHMP4BP1P59074 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CHMP4BP1P59074 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHMP4BP1P59074 USP40-206ENST00000443711 628 ntTSL 2 BASIC17.64■□□□□ 0.41
CHMP4BP1P59074 AC245100.5-201ENST00000452108 331 ntBASIC17.64■□□□□ 0.41
CHMP4BP1P59074 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC17.64■□□□□ 0.41
CHMP4BP1P59074 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC17.64■□□□□ 0.41
CHMP4BP1P59074 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC17.64■□□□□ 0.41
CHMP4BP1P59074 USB1-203ENST00000539737 1212 ntTSL 2 BASIC17.64■□□□□ 0.41
CHMP4BP1P59074 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CHMP4BP1P59074 MIR5189-201ENST00000577370 114 ntBASIC17.64■□□□□ 0.41
CHMP4BP1P59074 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC17.64■□□□□ 0.41
CHMP4BP1P59074 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
CHMP4BP1P59074 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
CHMP4BP1P59074 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHMP4BP1P59074 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHMP4BP1P59074 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHMP4BP1P59074 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHMP4BP1P59074 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC17.64■□□□□ 0.41
CHMP4BP1P59074 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CHMP4BP1P59074 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CHMP4BP1P59074 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHMP4BP1P59074 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CHMP4BP1P59074 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC17.64■□□□□ 0.41
CHMP4BP1P59074 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHMP4BP1P59074 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CHMP4BP1P59074 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CHMP4BP1P59074 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC17.63■□□□□ 0.41
CHMP4BP1P59074 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC17.63■□□□□ 0.41
CHMP4BP1P59074 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHMP4BP1P59074 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHMP4BP1P59074 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC17.63■□□□□ 0.41
CHMP4BP1P59074 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHMP4BP1P59074 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHMP4BP1P59074 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CHMP4BP1P59074 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC17.63■□□□□ 0.41
CHMP4BP1P59074 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHMP4BP1P59074 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC17.63■□□□□ 0.41
CHMP4BP1P59074 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CHMP4BP1P59074 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CHMP4BP1P59074 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CHMP4BP1P59074 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC17.63■□□□□ 0.41
CHMP4BP1P59074 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CHMP4BP1P59074 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC17.63■□□□□ 0.41
CHMP4BP1P59074 LBX2-201ENST00000341396 886 ntTSL 3 BASIC17.63■□□□□ 0.41
CHMP4BP1P59074 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
CHMP4BP1P59074 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
CHMP4BP1P59074 AL442647.2-201ENST00000429864 857 ntBASIC17.63■□□□□ 0.41
CHMP4BP1P59074 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC17.63■□□□□ 0.41
CHMP4BP1P59074 PHKG1P2-201ENST00000457537 863 ntBASIC17.63■□□□□ 0.41
CHMP4BP1P59074 VDAC1P7-201ENST00000462417 847 ntBASIC17.63■□□□□ 0.41
CHMP4BP1P59074 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CHMP4BP1P59074 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC17.63■□□□□ 0.41
CHMP4BP1P59074 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
CHMP4BP1P59074 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
CHMP4BP1P59074 MIR4538-201ENST00000581377 78 ntBASIC17.63■□□□□ 0.41
CHMP4BP1P59074 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC17.63■□□□□ 0.41
CHMP4BP1P59074 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms