Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
NCKAP1LP55160 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
NCKAP1LP55160 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NCKAP1LP55160 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
NCKAP1LP55160 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
NCKAP1LP55160 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NCKAP1LP55160 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NCKAP1LP55160 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NCKAP1LP55160 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC16.78■□□□□ 0.28
NCKAP1LP55160 TP73-213ENST00000604479 1623 ntTSL 5 BASIC16.78■□□□□ 0.28
NCKAP1LP55160 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NCKAP1LP55160 LILRP1-201ENST00000444199 1370 ntBASIC16.77■□□□□ 0.28
NCKAP1LP55160 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
NCKAP1LP55160 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC16.77■□□□□ 0.28
NCKAP1LP55160 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
NCKAP1LP55160 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NCKAP1LP55160 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NCKAP1LP55160 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
NCKAP1LP55160 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NCKAP1LP55160 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NCKAP1LP55160 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
NCKAP1LP55160 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC16.77■□□□□ 0.28
NCKAP1LP55160 AC005229.1-201ENST00000392885 409 ntBASIC16.77■□□□□ 0.28
NCKAP1LP55160 PES1-204ENST00000402284 2144 ntTSL 5 BASIC16.77■□□□□ 0.28
NCKAP1LP55160 RPL28-203ENST00000428193 573 ntTSL 2 BASIC16.77■□□□□ 0.28
NCKAP1LP55160 RPL28-204ENST00000431533 590 ntTSL 2 BASIC16.77■□□□□ 0.28
NCKAP1LP55160 EIF3FP3-201ENST00000434851 1086 ntBASIC16.77■□□□□ 0.28
NCKAP1LP55160 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC16.77■□□□□ 0.28
NCKAP1LP55160 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
NCKAP1LP55160 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC16.77■□□□□ 0.28
NCKAP1LP55160 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
NCKAP1LP55160 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
NCKAP1LP55160 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC16.77■□□□□ 0.28
NCKAP1LP55160 RPL28-207ENST00000558815 616 ntTSL 2 BASIC16.77■□□□□ 0.28
NCKAP1LP55160 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC16.77■□□□□ 0.28
NCKAP1LP55160 GNRHR2-203ENST00000581100 1187 ntBASIC16.77■□□□□ 0.28
NCKAP1LP55160 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
NCKAP1LP55160 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
NCKAP1LP55160 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC16.77■□□□□ 0.28
NCKAP1LP55160 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC16.77■□□□□ 0.28
NCKAP1LP55160 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
NCKAP1LP55160 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
NCKAP1LP55160 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC16.77■□□□□ 0.27
NCKAP1LP55160 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC16.77■□□□□ 0.27
NCKAP1LP55160 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
NCKAP1LP55160 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
NCKAP1LP55160 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
NCKAP1LP55160 TCAF2P1-201ENST00000291129 2421 ntBASIC16.77■□□□□ 0.27
NCKAP1LP55160 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
NCKAP1LP55160 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC16.77■□□□□ 0.27
NCKAP1LP55160 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
NCKAP1LP55160 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.27
NCKAP1LP55160 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
NCKAP1LP55160 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NCKAP1LP55160 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NCKAP1LP55160 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NCKAP1LP55160 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NCKAP1LP55160 AC144831.1-201ENST00000573312 2656 ntBASIC16.76■□□□□ 0.27
NCKAP1LP55160 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NCKAP1LP55160 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC16.76■□□□□ 0.27
NCKAP1LP55160 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
NCKAP1LP55160 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
NCKAP1LP55160 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC16.76■□□□□ 0.27
NCKAP1LP55160 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.76■□□□□ 0.27
NCKAP1LP55160 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
NCKAP1LP55160 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NCKAP1LP55160 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
NCKAP1LP55160 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
NCKAP1LP55160 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC16.76■□□□□ 0.27
NCKAP1LP55160 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
NCKAP1LP55160 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NCKAP1LP55160 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC16.76■□□□□ 0.27
NCKAP1LP55160 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
NCKAP1LP55160 BTNL10-201ENST00000595971 695 ntBASIC16.76■□□□□ 0.27
NCKAP1LP55160 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NCKAP1LP55160 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
NCKAP1LP55160 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NCKAP1LP55160 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NCKAP1LP55160 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC16.76■□□□□ 0.27
NCKAP1LP55160 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.76■□□□□ 0.27
NCKAP1LP55160 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
NCKAP1LP55160 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC16.76■□□□□ 0.27
NCKAP1LP55160 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC16.76■□□□□ 0.27
NCKAP1LP55160 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
NCKAP1LP55160 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NCKAP1LP55160 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NCKAP1LP55160 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NCKAP1LP55160 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NCKAP1LP55160 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
NCKAP1LP55160 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC16.76■□□□□ 0.27
NCKAP1LP55160 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
NCKAP1LP55160 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NCKAP1LP55160 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NCKAP1LP55160 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
NCKAP1LP55160 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NCKAP1LP55160 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NCKAP1LP55160 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
NCKAP1LP55160 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NCKAP1LP55160 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC16.75■□□□□ 0.27
NCKAP1LP55160 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms