Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
APOC4P55056 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
APOC4P55056 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
APOC4P55056 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
APOC4P55056 DKFZP434H168-201ENST00000567381 1905 ntBASIC11.27□□□□□ -0.61
APOC4P55056 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
APOC4P55056 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC11.27□□□□□ -0.61
APOC4P55056 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
APOC4P55056 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC11.27□□□□□ -0.61
APOC4P55056 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC11.27□□□□□ -0.61
APOC4P55056 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
APOC4P55056 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC11.26□□□□□ -0.61
APOC4P55056 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
APOC4P55056 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
APOC4P55056 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
APOC4P55056 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC11.26□□□□□ -0.61
APOC4P55056 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
APOC4P55056 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
APOC4P55056 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
APOC4P55056 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
APOC4P55056 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
APOC4P55056 GUK1-206ENST00000366723 845 ntTSL 5 BASIC11.26□□□□□ -0.61
APOC4P55056 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC11.26□□□□□ -0.61
APOC4P55056 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
APOC4P55056 STX1A-203ENST00000395155 783 ntTSL 2 BASIC11.26□□□□□ -0.61
APOC4P55056 PGF-202ENST00000405431 666 ntTSL 5 BASIC11.26□□□□□ -0.61
APOC4P55056 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC11.26□□□□□ -0.61
APOC4P55056 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
APOC4P55056 RPS2P32-201ENST00000439199 892 ntBASIC11.26□□□□□ -0.61
APOC4P55056 RPL7P3-201ENST00000441388 714 ntBASIC11.26□□□□□ -0.61
APOC4P55056 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC11.26□□□□□ -0.61
APOC4P55056 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
APOC4P55056 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC11.26□□□□□ -0.61
APOC4P55056 SAMD11P1-201ENST00000571429 661 ntBASIC11.26□□□□□ -0.61
APOC4P55056 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC11.26□□□□□ -0.61
APOC4P55056 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
APOC4P55056 Six3os1_5.1-201ENST00000611000 271 ntBASIC11.26□□□□□ -0.61
APOC4P55056 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC11.26□□□□□ -0.61
APOC4P55056 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
APOC4P55056 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC11.26□□□□□ -0.61
APOC4P55056 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
APOC4P55056 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
APOC4P55056 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC11.26□□□□□ -0.61
APOC4P55056 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
APOC4P55056 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
APOC4P55056 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
APOC4P55056 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
APOC4P55056 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
APOC4P55056 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
APOC4P55056 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
APOC4P55056 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC11.26□□□□□ -0.61
APOC4P55056 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
APOC4P55056 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
APOC4P55056 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC11.26□□□□□ -0.61
APOC4P55056 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
APOC4P55056 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
APOC4P55056 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC11.25□□□□□ -0.61
APOC4P55056 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
APOC4P55056 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
APOC4P55056 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC11.25□□□□□ -0.61
APOC4P55056 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC11.25□□□□□ -0.61
APOC4P55056 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
APOC4P55056 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
APOC4P55056 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
APOC4P55056 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC11.25□□□□□ -0.61
APOC4P55056 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC11.25□□□□□ -0.61
APOC4P55056 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
APOC4P55056 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
APOC4P55056 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC11.25□□□□□ -0.61
APOC4P55056 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC11.25□□□□□ -0.61
APOC4P55056 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
APOC4P55056 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
APOC4P55056 AC092127.1-201ENST00000567093 3455 ntBASIC11.25□□□□□ -0.61
APOC4P55056 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
APOC4P55056 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC11.25□□□□□ -0.61
APOC4P55056 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC11.25□□□□□ -0.61
APOC4P55056 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
APOC4P55056 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC11.25□□□□□ -0.61
APOC4P55056 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC11.25□□□□□ -0.61
APOC4P55056 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC11.25□□□□□ -0.61
APOC4P55056 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
APOC4P55056 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
APOC4P55056 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC11.25□□□□□ -0.61
APOC4P55056 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
APOC4P55056 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
APOC4P55056 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
APOC4P55056 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
APOC4P55056 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
APOC4P55056 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
APOC4P55056 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
APOC4P55056 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
APOC4P55056 AC092933.1-201ENST00000393644 945 ntBASIC11.25□□□□□ -0.61
APOC4P55056 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC11.25□□□□□ -0.61
APOC4P55056 ACTBP8-201ENST00000403258 1108 ntBASIC11.25□□□□□ -0.61
APOC4P55056 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC11.25□□□□□ -0.61
APOC4P55056 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC11.25□□□□□ -0.61
APOC4P55056 KLF2P2-201ENST00000416807 1039 ntBASIC11.25□□□□□ -0.61
APOC4P55056 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC11.25□□□□□ -0.61
APOC4P55056 FO681548.1-201ENST00000455617 1132 ntBASIC11.25□□□□□ -0.61
APOC4P55056 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC11.25□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms