Protein–RNA interactions for Protein: P55036

PSMD4, 26S proteasome non-ATPase regulatory subunit 4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4P55036 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PSMD4P55036 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PSMD4P55036 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
PSMD4P55036 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PSMD4P55036 STRN-202ENST00000379213 2254 ntTSL 5 BASIC14.38□□□□□ -0.11
PSMD4P55036 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PSMD4P55036 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PSMD4P55036 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PSMD4P55036 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
PSMD4P55036 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PSMD4P55036 AMT-224ENST00000635808 1610 ntTSL 5 BASIC14.37□□□□□ -0.11
PSMD4P55036 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC14.37□□□□□ -0.11
PSMD4P55036 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
PSMD4P55036 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PSMD4P55036 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
PSMD4P55036 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PSMD4P55036 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PSMD4P55036 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC14.37□□□□□ -0.11
PSMD4P55036 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
PSMD4P55036 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PSMD4P55036 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PSMD4P55036 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PSMD4P55036 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
PSMD4P55036 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC14.37□□□□□ -0.11
PSMD4P55036 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
PSMD4P55036 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PSMD4P55036 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC14.37□□□□□ -0.11
PSMD4P55036 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PSMD4P55036 AC144831.1-201ENST00000573312 2656 ntBASIC14.37□□□□□ -0.11
PSMD4P55036 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
PSMD4P55036 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PSMD4P55036 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PSMD4P55036 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PSMD4P55036 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
PSMD4P55036 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC14.37□□□□□ -0.11
PSMD4P55036 RPL13AP25-201ENST00000484130 612 ntBASIC14.37□□□□□ -0.11
PSMD4P55036 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC14.37□□□□□ -0.11
PSMD4P55036 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PSMD4P55036 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PSMD4P55036 TBCB-211ENST00000589996 724 ntTSL 3 BASIC14.37□□□□□ -0.11
PSMD4P55036 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC14.37□□□□□ -0.11
PSMD4P55036 AL158212.4-201ENST00000624062 1286 ntBASIC14.37□□□□□ -0.11
PSMD4P55036 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC14.37□□□□□ -0.11
PSMD4P55036 AL645728.2-202ENST00000641679 227 ntBASIC14.37□□□□□ -0.11
PSMD4P55036 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
PSMD4P55036 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
PSMD4P55036 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
PSMD4P55036 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PSMD4P55036 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PSMD4P55036 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PSMD4P55036 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC14.37□□□□□ -0.11
PSMD4P55036 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PSMD4P55036 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PSMD4P55036 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PSMD4P55036 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PSMD4P55036 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC14.37□□□□□ -0.11
PSMD4P55036 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PSMD4P55036 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PSMD4P55036 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC14.37□□□□□ -0.11
PSMD4P55036 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PSMD4P55036 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PSMD4P55036 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PSMD4P55036 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
PSMD4P55036 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
PSMD4P55036 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
PSMD4P55036 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
PSMD4P55036 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
PSMD4P55036 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PSMD4P55036 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC14.36□□□□□ -0.11
PSMD4P55036 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PSMD4P55036 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
PSMD4P55036 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
PSMD4P55036 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
PSMD4P55036 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PSMD4P55036 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PSMD4P55036 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
PSMD4P55036 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
PSMD4P55036 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
PSMD4P55036 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC14.36□□□□□ -0.11
PSMD4P55036 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
PSMD4P55036 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
PSMD4P55036 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
PSMD4P55036 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PSMD4P55036 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PSMD4P55036 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
PSMD4P55036 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PSMD4P55036 SPDYE19P-201ENST00000338590 713 ntBASIC14.36□□□□□ -0.11
PSMD4P55036 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
PSMD4P55036 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PSMD4P55036 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC14.36□□□□□ -0.11
PSMD4P55036 TSPY16P-201ENST00000449843 468 ntBASIC14.36□□□□□ -0.11
PSMD4P55036 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
PSMD4P55036 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC14.36□□□□□ -0.11
PSMD4P55036 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC14.36□□□□□ -0.11
PSMD4P55036 AC055876.2-201ENST00000531834 546 ntBASIC14.36□□□□□ -0.11
PSMD4P55036 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PSMD4P55036 ARL16-202ENST00000570561 768 ntTSL 2 BASIC14.36□□□□□ -0.11
PSMD4P55036 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC14.36□□□□□ -0.11
PSMD4P55036 INO80C-206ENST00000586489 594 ntTSL 3 BASIC14.36□□□□□ -0.11
PSMD4P55036 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms