Protein–RNA interactions for Protein: P55008

AIF1, Allograft inflammatory factor 1, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AIF1P55008 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
AIF1P55008 PES1-204ENST00000402284 2144 ntTSL 5 BASIC15.8■□□□□ 0.12
AIF1P55008 NFIC-211ENST00000641145 8399 ntBASIC15.8■□□□□ 0.12
AIF1P55008 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
AIF1P55008 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
AIF1P55008 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
AIF1P55008 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
AIF1P55008 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC15.8■□□□□ 0.12
AIF1P55008 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
AIF1P55008 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
AIF1P55008 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
AIF1P55008 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
AIF1P55008 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
AIF1P55008 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
AIF1P55008 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
AIF1P55008 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
AIF1P55008 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
AIF1P55008 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
AIF1P55008 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
AIF1P55008 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
AIF1P55008 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC15.8■□□□□ 0.12
AIF1P55008 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC15.8■□□□□ 0.12
AIF1P55008 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
AIF1P55008 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
AIF1P55008 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
AIF1P55008 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC15.8■□□□□ 0.12
AIF1P55008 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
AIF1P55008 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
AIF1P55008 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
AIF1P55008 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
AIF1P55008 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
AIF1P55008 AC022137.2-201ENST00000503482 481 ntBASIC15.8■□□□□ 0.12
AIF1P55008 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC15.8■□□□□ 0.12
AIF1P55008 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC15.8■□□□□ 0.12
AIF1P55008 CLUHP6-201ENST00000580789 941 ntBASIC15.8■□□□□ 0.12
AIF1P55008 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC15.8■□□□□ 0.12
AIF1P55008 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC15.8■□□□□ 0.12
AIF1P55008 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC15.8■□□□□ 0.12
AIF1P55008 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC15.8■□□□□ 0.12
AIF1P55008 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
AIF1P55008 AC013726.1-201ENST00000563747 2285 ntBASIC15.8■□□□□ 0.12
AIF1P55008 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
AIF1P55008 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
AIF1P55008 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
AIF1P55008 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
AIF1P55008 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC15.8■□□□□ 0.12
AIF1P55008 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
AIF1P55008 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
AIF1P55008 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
AIF1P55008 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
AIF1P55008 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
AIF1P55008 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC15.79■□□□□ 0.12
AIF1P55008 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
AIF1P55008 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC15.79■□□□□ 0.12
AIF1P55008 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
AIF1P55008 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
AIF1P55008 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
AIF1P55008 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
AIF1P55008 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
AIF1P55008 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
AIF1P55008 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC15.79■□□□□ 0.12
AIF1P55008 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
AIF1P55008 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
AIF1P55008 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
AIF1P55008 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
AIF1P55008 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
AIF1P55008 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
AIF1P55008 RNU1-114P-201ENST00000365297 166 ntBASIC15.79■□□□□ 0.12
AIF1P55008 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC15.79■□□□□ 0.12
AIF1P55008 KLF2P2-201ENST00000416807 1039 ntBASIC15.79■□□□□ 0.12
AIF1P55008 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC15.79■□□□□ 0.12
AIF1P55008 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
AIF1P55008 AC011495.1-201ENST00000498085 584 ntBASIC15.79■□□□□ 0.12
AIF1P55008 AC022616.1-201ENST00000518688 554 ntBASIC15.79■□□□□ 0.12
AIF1P55008 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
AIF1P55008 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
AIF1P55008 KSR1-207ENST00000578981 748 ntTSL 4 BASIC15.79■□□□□ 0.12
AIF1P55008 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC15.79■□□□□ 0.12
AIF1P55008 ATF5-205ENST00000600336 682 ntTSL 2 BASIC15.79■□□□□ 0.12
AIF1P55008 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC15.79■□□□□ 0.12
AIF1P55008 AC025048.6-201ENST00000634326 1161 ntBASIC15.79■□□□□ 0.12
AIF1P55008 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
AIF1P55008 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
AIF1P55008 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC15.79■□□□□ 0.12
AIF1P55008 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
AIF1P55008 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC15.79■□□□□ 0.12
AIF1P55008 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
AIF1P55008 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC15.79■□□□□ 0.12
AIF1P55008 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
AIF1P55008 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
AIF1P55008 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
AIF1P55008 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
AIF1P55008 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
AIF1P55008 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
AIF1P55008 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC15.79■□□□□ 0.12
AIF1P55008 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
AIF1P55008 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
AIF1P55008 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC15.79■□□□□ 0.12
AIF1P55008 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC15.79■□□□□ 0.12
AIF1P55008 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms