Protein–RNA interactions for Protein: P51157

RAB28, Ras-related protein Rab-28, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P51157 TMEM14DP-201ENST00000422205 345 ntBASIC14.82□□□□□ -0.04
RAB28P51157 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC14.82□□□□□ -0.04
RAB28P51157 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC14.82□□□□□ -0.04
RAB28P51157 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC14.82□□□□□ -0.04
RAB28P51157 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC14.82□□□□□ -0.04
RAB28P51157 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RAB28P51157 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RAB28P51157 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RAB28P51157 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC14.82□□□□□ -0.04
RAB28P51157 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
RAB28P51157 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC14.82□□□□□ -0.04
RAB28P51157 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
RAB28P51157 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC14.82□□□□□ -0.04
RAB28P51157 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC14.82□□□□□ -0.04
RAB28P51157 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
RAB28P51157 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RAB28P51157 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RAB28P51157 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RAB28P51157 AC134312.5-201ENST00000568031 1313 ntBASIC14.82□□□□□ -0.04
RAB28P51157 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RAB28P51157 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC14.82□□□□□ -0.04
RAB28P51157 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RAB28P51157 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RAB28P51157 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
RAB28P51157 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RAB28P51157 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RAB28P51157 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RAB28P51157 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
RAB28P51157 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
RAB28P51157 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
RAB28P51157 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RAB28P51157 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RAB28P51157 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC14.82□□□□□ -0.04
RAB28P51157 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RAB28P51157 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RAB28P51157 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC14.81□□□□□ -0.04
RAB28P51157 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RAB28P51157 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RAB28P51157 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC14.81□□□□□ -0.04
RAB28P51157 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RAB28P51157 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
RAB28P51157 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
RAB28P51157 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
RAB28P51157 CELP-203ENST00000624767 2414 ntTSL 5 BASIC14.81□□□□□ -0.04
RAB28P51157 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC14.81□□□□□ -0.04
RAB28P51157 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC14.81□□□□□ -0.04
RAB28P51157 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC14.81□□□□□ -0.04
RAB28P51157 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
RAB28P51157 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RAB28P51157 RPS15-201ENST00000233609 534 ntTSL 2 BASIC14.81□□□□□ -0.04
RAB28P51157 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RAB28P51157 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RAB28P51157 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RAB28P51157 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
RAB28P51157 B9D1-203ENST00000395615 805 ntTSL 3 BASIC14.81□□□□□ -0.04
RAB28P51157 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
RAB28P51157 AC244107.1-201ENST00000442033 332 ntBASIC14.81□□□□□ -0.04
RAB28P51157 AL355864.2-201ENST00000447420 863 ntBASIC14.81□□□□□ -0.04
RAB28P51157 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC14.81□□□□□ -0.04
RAB28P51157 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC14.81□□□□□ -0.04
RAB28P51157 USP32P1-208ENST00000506594 1164 ntBASIC14.81□□□□□ -0.04
RAB28P51157 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC14.81□□□□□ -0.04
RAB28P51157 SLC25A47P1-201ENST00000531577 414 ntBASIC14.81□□□□□ -0.04
RAB28P51157 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC14.81□□□□□ -0.04
RAB28P51157 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC14.81□□□□□ -0.04
RAB28P51157 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC14.81□□□□□ -0.04
RAB28P51157 RPS15-205ENST00000586686 562 ntTSL 5 BASIC14.81□□□□□ -0.04
RAB28P51157 RPS15-208ENST00000591804 711 ntTSL 5 BASIC14.81□□□□□ -0.04
RAB28P51157 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
RAB28P51157 AC233724.13-201ENST00000598383 410 ntBASIC14.81□□□□□ -0.04
RAB28P51157 SERF2-217ENST00000630046 862 ntTSL 5 BASIC14.81□□□□□ -0.04
RAB28P51157 AC046158.3-201ENST00000624947 2558 ntBASIC14.81□□□□□ -0.04
RAB28P51157 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RAB28P51157 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RAB28P51157 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RAB28P51157 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC14.81□□□□□ -0.04
RAB28P51157 AL360270.3-201ENST00000609118 1348 ntBASIC14.81□□□□□ -0.04
RAB28P51157 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
RAB28P51157 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC14.81□□□□□ -0.04
RAB28P51157 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
RAB28P51157 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RAB28P51157 KRT8P14-201ENST00000414254 1442 ntBASIC14.81□□□□□ -0.04
RAB28P51157 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RAB28P51157 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RAB28P51157 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RAB28P51157 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RAB28P51157 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
RAB28P51157 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
RAB28P51157 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RAB28P51157 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC14.81□□□□□ -0.04
RAB28P51157 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC14.81□□□□□ -0.04
RAB28P51157 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RAB28P51157 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RAB28P51157 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
RAB28P51157 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC14.81□□□□□ -0.04
RAB28P51157 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
RAB28P51157 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
RAB28P51157 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAB28P51157 MSTO2P-201ENST00000314835 1709 ntBASIC14.8□□□□□ -0.04
RAB28P51157 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms