Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RNF144AP50876 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RNF144AP50876 AC084364.1-201ENST00000551967 1556 ntBASIC14.39□□□□□ -0.11
RNF144AP50876 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
RNF144AP50876 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
RNF144AP50876 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RNF144AP50876 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RNF144AP50876 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC14.38□□□□□ -0.11
RNF144AP50876 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RNF144AP50876 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RNF144AP50876 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RNF144AP50876 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC14.38□□□□□ -0.11
RNF144AP50876 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC14.38□□□□□ -0.11
RNF144AP50876 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RNF144AP50876 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC14.38□□□□□ -0.11
RNF144AP50876 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
RNF144AP50876 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
RNF144AP50876 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC14.38□□□□□ -0.11
RNF144AP50876 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RNF144AP50876 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC14.38□□□□□ -0.11
RNF144AP50876 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
RNF144AP50876 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RNF144AP50876 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC14.38□□□□□ -0.11
RNF144AP50876 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
RNF144AP50876 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC14.38□□□□□ -0.11
RNF144AP50876 RPL13P2-201ENST00000440687 659 ntBASIC14.38□□□□□ -0.11
RNF144AP50876 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC14.38□□□□□ -0.11
RNF144AP50876 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
RNF144AP50876 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC14.38□□□□□ -0.11
RNF144AP50876 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC14.38□□□□□ -0.11
RNF144AP50876 UGT1A2P-201ENST00000454886 866 ntBASIC14.38□□□□□ -0.11
RNF144AP50876 AL512638.1-201ENST00000457493 794 ntBASIC14.38□□□□□ -0.11
RNF144AP50876 CYMP-203ENST00000474680 1263 ntBASIC14.38□□□□□ -0.11
RNF144AP50876 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC14.38□□□□□ -0.11
RNF144AP50876 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
RNF144AP50876 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
RNF144AP50876 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC14.38□□□□□ -0.11
RNF144AP50876 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC14.38□□□□□ -0.11
RNF144AP50876 CMC2-214ENST00000565925 640 ntTSL 5 BASIC14.38□□□□□ -0.11
RNF144AP50876 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC14.38□□□□□ -0.11
RNF144AP50876 AC074044.1-201ENST00000609673 707 ntBASIC14.38□□□□□ -0.11
RNF144AP50876 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
RNF144AP50876 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
RNF144AP50876 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
RNF144AP50876 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
RNF144AP50876 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC14.38□□□□□ -0.11
RNF144AP50876 TP73-209ENST00000603362 1668 ntTSL 5 BASIC14.38□□□□□ -0.11
RNF144AP50876 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RNF144AP50876 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RNF144AP50876 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RNF144AP50876 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RNF144AP50876 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
RNF144AP50876 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
RNF144AP50876 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RNF144AP50876 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RNF144AP50876 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
RNF144AP50876 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
RNF144AP50876 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RNF144AP50876 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
RNF144AP50876 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC14.37□□□□□ -0.11
RNF144AP50876 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RNF144AP50876 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC14.37□□□□□ -0.11
RNF144AP50876 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC14.37□□□□□ -0.11
RNF144AP50876 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RNF144AP50876 AC106881.1-201ENST00000605849 3329 ntBASIC14.37□□□□□ -0.11
RNF144AP50876 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC14.37□□□□□ -0.11
RNF144AP50876 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RNF144AP50876 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC14.37□□□□□ -0.11
RNF144AP50876 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RNF144AP50876 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RNF144AP50876 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC14.37□□□□□ -0.11
RNF144AP50876 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RNF144AP50876 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
RNF144AP50876 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RNF144AP50876 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC14.37□□□□□ -0.11
RNF144AP50876 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RNF144AP50876 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RNF144AP50876 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RNF144AP50876 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
RNF144AP50876 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC14.37□□□□□ -0.11
RNF144AP50876 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
RNF144AP50876 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC14.37□□□□□ -0.11
RNF144AP50876 LY6E-204ENST00000519546 971 ntTSL 2 BASIC14.37□□□□□ -0.11
RNF144AP50876 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC14.37□□□□□ -0.11
RNF144AP50876 AC135586.1-201ENST00000539323 574 ntBASIC14.37□□□□□ -0.11
RNF144AP50876 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
RNF144AP50876 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC14.37□□□□□ -0.11
RNF144AP50876 DUT-210ENST00000559935 569 ntTSL 3 BASIC14.37□□□□□ -0.11
RNF144AP50876 AC104794.3-201ENST00000566840 1248 ntBASIC14.37□□□□□ -0.11
RNF144AP50876 TEX48-202ENST00000612244 662 ntTSL 3 BASIC14.37□□□□□ -0.11
RNF144AP50876 RAB34-223ENST00000636154 730 ntTSL 2 BASIC14.37□□□□□ -0.11
RNF144AP50876 RDX-218ENST00000544551 4117 ntTSL 2 BASIC14.37□□□□□ -0.11
RNF144AP50876 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RNF144AP50876 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
RNF144AP50876 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RNF144AP50876 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
RNF144AP50876 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC14.37□□□□□ -0.11
RNF144AP50876 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
RNF144AP50876 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
RNF144AP50876 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms