Protein–RNA interactions for Protein: P48788

TNNI2, Troponin I, fast skeletal muscle, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNNI2P48788 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TNNI2P48788 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC18.17■□□□□ 0.5
TNNI2P48788 AC138649.2-201ENST00000615886 705 ntBASIC18.17■□□□□ 0.5
TNNI2P48788 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TNNI2P48788 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TNNI2P48788 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC18.17■□□□□ 0.5
TNNI2P48788 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TNNI2P48788 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TNNI2P48788 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
TNNI2P48788 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TNNI2P48788 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC18.17■□□□□ 0.5
TNNI2P48788 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC18.17■□□□□ 0.5
TNNI2P48788 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
TNNI2P48788 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TNNI2P48788 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TNNI2P48788 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TNNI2P48788 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TNNI2P48788 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TNNI2P48788 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC18.16■□□□□ 0.5
TNNI2P48788 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
TNNI2P48788 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC18.16■□□□□ 0.5
TNNI2P48788 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC18.16■□□□□ 0.5
TNNI2P48788 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC18.16■□□□□ 0.5
TNNI2P48788 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TNNI2P48788 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC18.16■□□□□ 0.5
TNNI2P48788 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC18.16■□□□□ 0.5
TNNI2P48788 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TNNI2P48788 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
TNNI2P48788 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC18.16■□□□□ 0.5
TNNI2P48788 AC008894.3-201ENST00000624324 3103 ntBASIC18.16■□□□□ 0.5
TNNI2P48788 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TNNI2P48788 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TNNI2P48788 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TNNI2P48788 POM121L8P-201ENST00000417732 1281 ntBASIC18.16■□□□□ 0.5
TNNI2P48788 POM121L9P-203ENST00000441984 1285 ntBASIC18.16■□□□□ 0.5
TNNI2P48788 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC18.16■□□□□ 0.5
TNNI2P48788 SERPINA13P-202ENST00000478994 924 ntBASIC18.16■□□□□ 0.5
TNNI2P48788 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC18.16■□□□□ 0.5
TNNI2P48788 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC18.16■□□□□ 0.5
TNNI2P48788 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC18.16■□□□□ 0.5
TNNI2P48788 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC18.16■□□□□ 0.5
TNNI2P48788 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC18.16■□□□□ 0.5
TNNI2P48788 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TNNI2P48788 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TNNI2P48788 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
TNNI2P48788 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
TNNI2P48788 TNRC18P3-201ENST00000441896 2691 ntBASIC18.16■□□□□ 0.5
TNNI2P48788 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TNNI2P48788 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC18.16■□□□□ 0.5
TNNI2P48788 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TNNI2P48788 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TNNI2P48788 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TNNI2P48788 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TNNI2P48788 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TNNI2P48788 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC18.16■□□□□ 0.5
TNNI2P48788 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TNNI2P48788 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
TNNI2P48788 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC18.15■□□□□ 0.5
TNNI2P48788 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TNNI2P48788 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TNNI2P48788 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC18.15■□□□□ 0.5
TNNI2P48788 ILF3-AS1-201ENST00000591501 1983 ntBASIC18.15■□□□□ 0.5
TNNI2P48788 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TNNI2P48788 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
TNNI2P48788 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
TNNI2P48788 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TNNI2P48788 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TNNI2P48788 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC18.15■□□□□ 0.5
TNNI2P48788 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
TNNI2P48788 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TNNI2P48788 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TNNI2P48788 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC18.15■□□□□ 0.5
TNNI2P48788 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC18.15■□□□□ 0.5
TNNI2P48788 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TNNI2P48788 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TNNI2P48788 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC18.15■□□□□ 0.5
TNNI2P48788 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC18.15■□□□□ 0.5
TNNI2P48788 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
TNNI2P48788 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TNNI2P48788 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC18.15■□□□□ 0.5
TNNI2P48788 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TNNI2P48788 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TNNI2P48788 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TNNI2P48788 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TNNI2P48788 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC18.15■□□□□ 0.5
TNNI2P48788 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TNNI2P48788 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC18.15■□□□□ 0.5
TNNI2P48788 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
TNNI2P48788 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
TNNI2P48788 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
TNNI2P48788 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TNNI2P48788 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TNNI2P48788 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TNNI2P48788 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
TNNI2P48788 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
TNNI2P48788 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
TNNI2P48788 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
TNNI2P48788 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC18.14■□□□□ 0.49
TNNI2P48788 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC18.14■□□□□ 0.49
TNNI2P48788 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms