Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
SOX2P48431 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
SOX2P48431 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
SOX2P48431 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SOX2P48431 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
SOX2P48431 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SOX2P48431 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC13.62□□□□□ -0.23
SOX2P48431 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SOX2P48431 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SOX2P48431 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SOX2P48431 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SOX2P48431 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SOX2P48431 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC13.62□□□□□ -0.23
SOX2P48431 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SOX2P48431 IL9RP2-201ENST00000423948 1312 ntBASIC13.62□□□□□ -0.23
SOX2P48431 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SOX2P48431 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SOX2P48431 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SOX2P48431 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SOX2P48431 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SOX2P48431 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SOX2P48431 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
SOX2P48431 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
SOX2P48431 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SOX2P48431 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC13.61□□□□□ -0.23
SOX2P48431 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
SOX2P48431 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
SOX2P48431 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SOX2P48431 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
SOX2P48431 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC13.61□□□□□ -0.23
SOX2P48431 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SOX2P48431 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SOX2P48431 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
SOX2P48431 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SOX2P48431 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
SOX2P48431 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC13.61□□□□□ -0.23
SOX2P48431 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
SOX2P48431 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
SOX2P48431 PTMS-202ENST00000389462 773 ntTSL 2 BASIC13.61□□□□□ -0.23
SOX2P48431 TIMM8BP1-201ENST00000452384 211 ntBASIC13.61□□□□□ -0.23
SOX2P48431 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC13.61□□□□□ -0.23
SOX2P48431 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SOX2P48431 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC13.61□□□□□ -0.23
SOX2P48431 SLC25A39P2-201ENST00000537614 270 ntBASIC13.61□□□□□ -0.23
SOX2P48431 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC13.61□□□□□ -0.23
SOX2P48431 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC13.61□□□□□ -0.23
SOX2P48431 AC140113.2-201ENST00000604370 208 ntBASIC13.61□□□□□ -0.23
SOX2P48431 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SOX2P48431 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
SOX2P48431 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
SOX2P48431 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SOX2P48431 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
SOX2P48431 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC13.61□□□□□ -0.23
SOX2P48431 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SOX2P48431 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
SOX2P48431 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC13.61□□□□□ -0.23
SOX2P48431 AC104581.4-201ENST00000623126 3052 ntBASIC13.61□□□□□ -0.23
SOX2P48431 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SOX2P48431 GRK6P1-201ENST00000400595 1711 ntBASIC13.61□□□□□ -0.23
SOX2P48431 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC13.61□□□□□ -0.23
SOX2P48431 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
SOX2P48431 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
SOX2P48431 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
SOX2P48431 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SOX2P48431 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SOX2P48431 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
SOX2P48431 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC13.61□□□□□ -0.23
SOX2P48431 AMT-204ENST00000427987 1646 ntTSL 5 BASIC13.61□□□□□ -0.23
SOX2P48431 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SOX2P48431 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC13.6□□□□□ -0.23
SOX2P48431 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SOX2P48431 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SOX2P48431 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SOX2P48431 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC13.6□□□□□ -0.23
SOX2P48431 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC13.6□□□□□ -0.23
SOX2P48431 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SOX2P48431 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SOX2P48431 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC13.6□□□□□ -0.23
SOX2P48431 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC13.6□□□□□ -0.23
SOX2P48431 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SOX2P48431 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
SOX2P48431 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SOX2P48431 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
SOX2P48431 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SOX2P48431 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SOX2P48431 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
SOX2P48431 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SOX2P48431 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SOX2P48431 AC023274.1-201ENST00000418278 595 ntBASIC13.6□□□□□ -0.23
SOX2P48431 ADH5P3-201ENST00000433842 1137 ntBASIC13.6□□□□□ -0.23
SOX2P48431 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC13.6□□□□□ -0.23
SOX2P48431 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC13.6□□□□□ -0.23
SOX2P48431 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC13.6□□□□□ -0.23
SOX2P48431 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC13.6□□□□□ -0.23
SOX2P48431 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC13.6□□□□□ -0.23
SOX2P48431 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC13.6□□□□□ -0.23
SOX2P48431 KRT126P-201ENST00000549467 1181 ntBASIC13.6□□□□□ -0.23
SOX2P48431 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC13.6□□□□□ -0.23
SOX2P48431 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC13.6□□□□□ -0.23
SOX2P48431 LINC01225-203ENST00000563550 1244 ntBASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms