Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 SERF2-217ENST00000630046 862 ntTSL 5 BASIC14.14□□□□□ -0.15
RFC3P40938 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
RFC3P40938 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RFC3P40938 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC14.14□□□□□ -0.15
RFC3P40938 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC14.14□□□□□ -0.15
RFC3P40938 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
RFC3P40938 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
RFC3P40938 POLL-217ENST00000628479 1953 ntTSL 5 BASIC14.14□□□□□ -0.15
RFC3P40938 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC14.14□□□□□ -0.15
RFC3P40938 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC14.14□□□□□ -0.15
RFC3P40938 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RFC3P40938 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RFC3P40938 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RFC3P40938 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RFC3P40938 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RFC3P40938 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
RFC3P40938 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
RFC3P40938 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RFC3P40938 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RFC3P40938 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
RFC3P40938 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC14.13□□□□□ -0.15
RFC3P40938 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
RFC3P40938 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RFC3P40938 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RFC3P40938 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RFC3P40938 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.13□□□□□ -0.15
RFC3P40938 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
RFC3P40938 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RFC3P40938 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC14.13□□□□□ -0.15
RFC3P40938 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC14.13□□□□□ -0.15
RFC3P40938 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC14.13□□□□□ -0.15
RFC3P40938 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RFC3P40938 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RFC3P40938 BAATP1-201ENST00000412284 1225 ntBASIC14.13□□□□□ -0.15
RFC3P40938 USB1-202ENST00000423271 1217 ntTSL 2 BASIC14.13□□□□□ -0.15
RFC3P40938 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC14.13□□□□□ -0.15
RFC3P40938 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC14.13□□□□□ -0.15
RFC3P40938 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RFC3P40938 KLF2P4-201ENST00000451959 1225 ntBASIC14.13□□□□□ -0.15
RFC3P40938 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
RFC3P40938 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
RFC3P40938 APRT-204ENST00000563655 709 ntTSL 5 BASIC14.13□□□□□ -0.15
RFC3P40938 AP005482.1-201ENST00000563722 1273 ntBASIC14.13□□□□□ -0.15
RFC3P40938 AC009486.1-201ENST00000569860 813 ntBASIC14.13□□□□□ -0.15
RFC3P40938 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC14.13□□□□□ -0.15
RFC3P40938 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RFC3P40938 UBL5-208ENST00000593087 320 ntTSL 3 BASIC14.13□□□□□ -0.15
RFC3P40938 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RFC3P40938 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RFC3P40938 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC14.13□□□□□ -0.15
RFC3P40938 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RFC3P40938 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
RFC3P40938 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
RFC3P40938 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
RFC3P40938 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RFC3P40938 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC14.13□□□□□ -0.15
RFC3P40938 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RFC3P40938 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RFC3P40938 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
RFC3P40938 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
RFC3P40938 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RFC3P40938 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC14.12□□□□□ -0.15
RFC3P40938 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC14.12□□□□□ -0.15
RFC3P40938 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RFC3P40938 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RFC3P40938 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
RFC3P40938 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
RFC3P40938 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RFC3P40938 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RFC3P40938 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.12□□□□□ -0.15
RFC3P40938 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
RFC3P40938 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RFC3P40938 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RFC3P40938 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RFC3P40938 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
RFC3P40938 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
RFC3P40938 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
RFC3P40938 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RFC3P40938 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RFC3P40938 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RFC3P40938 BOLA2P3-201ENST00000404566 256 ntBASIC14.12□□□□□ -0.15
RFC3P40938 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC14.12□□□□□ -0.15
RFC3P40938 HLA-V-201ENST00000429037 534 ntBASIC14.12□□□□□ -0.15
RFC3P40938 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC14.12□□□□□ -0.15
RFC3P40938 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RFC3P40938 MFF-223ENST00000524634 647 ntTSL 2 BASIC14.12□□□□□ -0.15
RFC3P40938 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC14.12□□□□□ -0.15
RFC3P40938 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC14.12□□□□□ -0.15
RFC3P40938 AP001063.1-201ENST00000568332 529 ntBASIC14.12□□□□□ -0.15
RFC3P40938 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RFC3P40938 IFT20-206ENST00000578122 834 ntTSL 2 BASIC14.12□□□□□ -0.15
RFC3P40938 IFT20-208ENST00000578985 831 ntTSL 3 BASIC14.12□□□□□ -0.15
RFC3P40938 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC14.12□□□□□ -0.15
RFC3P40938 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC14.12□□□□□ -0.15
RFC3P40938 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
RFC3P40938 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC14.12□□□□□ -0.15
RFC3P40938 PFAS-212ENST00000625942 396 ntTSL 5 BASIC14.12□□□□□ -0.15
RFC3P40938 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC14.12□□□□□ -0.15
RFC3P40938 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RFC3P40938 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms