Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
GDNFP39905 MTHFR-210ENST00000641407 2387 ntBASIC13.47□□□□□ -0.25
GDNFP39905 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
GDNFP39905 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
GDNFP39905 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
GDNFP39905 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC13.47□□□□□ -0.25
GDNFP39905 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
GDNFP39905 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
GDNFP39905 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
GDNFP39905 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
GDNFP39905 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
GDNFP39905 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
GDNFP39905 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC13.47□□□□□ -0.25
GDNFP39905 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
GDNFP39905 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
GDNFP39905 CD82-202ENST00000342935 967 ntTSL 5 BASIC13.47□□□□□ -0.25
GDNFP39905 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
GDNFP39905 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC13.47□□□□□ -0.25
GDNFP39905 TFAMP1-201ENST00000412727 736 ntBASIC13.47□□□□□ -0.25
GDNFP39905 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC13.47□□□□□ -0.25
GDNFP39905 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC13.47□□□□□ -0.25
GDNFP39905 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC13.47□□□□□ -0.25
GDNFP39905 QPRT-203ENST00000562473 579 ntTSL 3 BASIC13.47□□□□□ -0.25
GDNFP39905 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC13.47□□□□□ -0.25
GDNFP39905 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC13.47□□□□□ -0.25
GDNFP39905 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC13.47□□□□□ -0.25
GDNFP39905 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
GDNFP39905 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC13.47□□□□□ -0.25
GDNFP39905 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
GDNFP39905 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
GDNFP39905 ZBTB45P2-201ENST00000452245 1531 ntBASIC13.47□□□□□ -0.25
GDNFP39905 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.25
GDNFP39905 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
GDNFP39905 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
GDNFP39905 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
GDNFP39905 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC13.47□□□□□ -0.25
GDNFP39905 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
GDNFP39905 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC13.47□□□□□ -0.25
GDNFP39905 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
GDNFP39905 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC13.47□□□□□ -0.25
GDNFP39905 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
GDNFP39905 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
GDNFP39905 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC13.47□□□□□ -0.25
GDNFP39905 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
GDNFP39905 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
GDNFP39905 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
GDNFP39905 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
GDNFP39905 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
GDNFP39905 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
GDNFP39905 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
GDNFP39905 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
GDNFP39905 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
GDNFP39905 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
GDNFP39905 AC092135.3-201ENST00000624151 1846 ntBASIC13.46□□□□□ -0.25
GDNFP39905 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
GDNFP39905 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
GDNFP39905 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
GDNFP39905 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
GDNFP39905 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC13.46□□□□□ -0.25
GDNFP39905 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
GDNFP39905 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
GDNFP39905 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
GDNFP39905 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
GDNFP39905 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
GDNFP39905 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
GDNFP39905 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
GDNFP39905 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
GDNFP39905 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
GDNFP39905 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC13.46□□□□□ -0.25
GDNFP39905 HTR5BP-201ENST00000430851 1154 ntBASIC13.46□□□□□ -0.25
GDNFP39905 PRYP6-201ENST00000514804 343 ntBASIC13.46□□□□□ -0.25
GDNFP39905 KRT8P48-201ENST00000515599 1220 ntBASIC13.46□□□□□ -0.25
GDNFP39905 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC13.46□□□□□ -0.25
GDNFP39905 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC13.46□□□□□ -0.25
GDNFP39905 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
GDNFP39905 MTDHP5-201ENST00000598980 586 ntBASIC13.46□□□□□ -0.25
GDNFP39905 CITED2-204ENST00000618718 901 ntTSL 2 BASIC13.46□□□□□ -0.25
GDNFP39905 C20orf181-201ENST00000623918 480 ntBASIC13.46□□□□□ -0.25
GDNFP39905 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC13.46□□□□□ -0.25
GDNFP39905 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
GDNFP39905 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
GDNFP39905 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
GDNFP39905 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC13.46□□□□□ -0.25
GDNFP39905 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
GDNFP39905 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
GDNFP39905 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC13.46□□□□□ -0.26
GDNFP39905 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
GDNFP39905 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC13.46□□□□□ -0.26
GDNFP39905 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
GDNFP39905 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
GDNFP39905 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC13.46□□□□□ -0.26
GDNFP39905 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC13.46□□□□□ -0.26
GDNFP39905 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC13.46□□□□□ -0.26
GDNFP39905 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC13.46□□□□□ -0.26
GDNFP39905 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
GDNFP39905 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.26
GDNFP39905 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
GDNFP39905 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
GDNFP39905 PCDHGB8P-201ENST00000502926 1973 ntBASIC13.45□□□□□ -0.26
GDNFP39905 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms