Protein–RNA interactions for Protein: P30926

CHRNB4, Neuronal acetylcholine receptor subunit beta-4, humanhuman

Predictions only

Length 498 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB4P30926 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CHRNB4P30926 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
CHRNB4P30926 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC13.66□□□□□ -0.22
CHRNB4P30926 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CHRNB4P30926 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC13.66□□□□□ -0.22
CHRNB4P30926 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC13.66□□□□□ -0.22
CHRNB4P30926 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CHRNB4P30926 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
CHRNB4P30926 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CHRNB4P30926 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
CHRNB4P30926 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CHRNB4P30926 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC13.66□□□□□ -0.22
CHRNB4P30926 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
CHRNB4P30926 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CHRNB4P30926 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CHRNB4P30926 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CHRNB4P30926 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC13.66□□□□□ -0.22
CHRNB4P30926 AL138709.1-201ENST00000614840 1693 ntBASIC13.66□□□□□ -0.22
CHRNB4P30926 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
CHRNB4P30926 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC13.66□□□□□ -0.22
CHRNB4P30926 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CHRNB4P30926 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CHRNB4P30926 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC13.65□□□□□ -0.22
CHRNB4P30926 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
CHRNB4P30926 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
CHRNB4P30926 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC13.65□□□□□ -0.22
CHRNB4P30926 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
CHRNB4P30926 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
CHRNB4P30926 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
CHRNB4P30926 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC13.65□□□□□ -0.22
CHRNB4P30926 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC13.65□□□□□ -0.22
CHRNB4P30926 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
CHRNB4P30926 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CHRNB4P30926 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC13.65□□□□□ -0.22
CHRNB4P30926 BANP-201ENST00000286122 2368 ntTSL 5 BASIC13.65□□□□□ -0.22
CHRNB4P30926 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
CHRNB4P30926 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CHRNB4P30926 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CHRNB4P30926 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC13.65□□□□□ -0.22
CHRNB4P30926 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CHRNB4P30926 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CHRNB4P30926 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CHRNB4P30926 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CHRNB4P30926 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
CHRNB4P30926 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
CHRNB4P30926 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
CHRNB4P30926 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC13.65□□□□□ -0.22
CHRNB4P30926 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CHRNB4P30926 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
CHRNB4P30926 NUS1P3-201ENST00000423502 862 ntBASIC13.65□□□□□ -0.22
CHRNB4P30926 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
CHRNB4P30926 OARD1-212ENST00000482515 832 ntTSL 2 BASIC13.65□□□□□ -0.22
CHRNB4P30926 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC13.65□□□□□ -0.22
CHRNB4P30926 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC13.65□□□□□ -0.22
CHRNB4P30926 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC13.65□□□□□ -0.22
CHRNB4P30926 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC13.65□□□□□ -0.22
CHRNB4P30926 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC13.65□□□□□ -0.22
CHRNB4P30926 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC13.65□□□□□ -0.22
CHRNB4P30926 PRKN-211ENST00000615065 261 ntTSL 5 BASIC13.65□□□□□ -0.22
CHRNB4P30926 GPR39-203ENST00000622084 900 ntTSL 5 BASIC13.65□□□□□ -0.22
CHRNB4P30926 AC244452.3-201ENST00000636814 210 ntBASIC13.65□□□□□ -0.22
CHRNB4P30926 AC006453.4-201ENST00000636949 1252 ntBASIC13.65□□□□□ -0.22
CHRNB4P30926 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC13.65□□□□□ -0.22
CHRNB4P30926 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC13.65□□□□□ -0.22
CHRNB4P30926 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC13.65□□□□□ -0.22
CHRNB4P30926 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC13.65□□□□□ -0.22
CHRNB4P30926 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CHRNB4P30926 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CHRNB4P30926 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CHRNB4P30926 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC13.65□□□□□ -0.22
CHRNB4P30926 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC13.65□□□□□ -0.22
CHRNB4P30926 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
CHRNB4P30926 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CHRNB4P30926 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CHRNB4P30926 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CHRNB4P30926 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CHRNB4P30926 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
CHRNB4P30926 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CHRNB4P30926 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CHRNB4P30926 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CHRNB4P30926 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CHRNB4P30926 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CHRNB4P30926 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
CHRNB4P30926 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CHRNB4P30926 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
CHRNB4P30926 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
CHRNB4P30926 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CHRNB4P30926 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC13.64□□□□□ -0.23
CHRNB4P30926 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CHRNB4P30926 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
CHRNB4P30926 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
CHRNB4P30926 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CHRNB4P30926 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CHRNB4P30926 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CHRNB4P30926 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CHRNB4P30926 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CHRNB4P30926 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
CHRNB4P30926 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CHRNB4P30926 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CHRNB4P30926 ACTBP8-201ENST00000403258 1108 ntBASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms