Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
RXRBP28702 PAIP2-201ENST00000265192 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RXRBP28702 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RXRBP28702 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
RXRBP28702 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RXRBP28702 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
RXRBP28702 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC19.57■□□□□ 0.72
RXRBP28702 AC092295.1-201ENST00000446262 434 ntTSL 3 BASIC19.57■□□□□ 0.72
RXRBP28702 CITED1-209ENST00000453707 998 ntAPPRIS ALT2 TSL 3 BASIC19.57■□□□□ 0.72
RXRBP28702 Z82249.1-201ENST00000453866 568 ntTSL 4 BASIC19.57■□□□□ 0.72
RXRBP28702 BCRP4-201ENST00000506079 804 ntBASIC19.57■□□□□ 0.72
RXRBP28702 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC19.57■□□□□ 0.72
RXRBP28702 AC090136.2-201ENST00000517809 420 ntBASIC19.57■□□□□ 0.72
RXRBP28702 OR5BD1P-201ENST00000532527 817 ntBASIC19.57■□□□□ 0.72
RXRBP28702 SPAG5-AS1-204ENST00000556050 871 ntTSL 2 BASIC19.57■□□□□ 0.72
RXRBP28702 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC19.57■□□□□ 0.72
RXRBP28702 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RXRBP28702 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RXRBP28702 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RXRBP28702 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
RXRBP28702 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RXRBP28702 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RXRBP28702 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RXRBP28702 GATB-213ENST00000515812 1893 ntTSL 5 BASIC19.56■□□□□ 0.72
RXRBP28702 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC19.56■□□□□ 0.72
RXRBP28702 AL138725.1-201ENST00000407347 1314 ntBASIC19.56■□□□□ 0.72
RXRBP28702 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
RXRBP28702 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RXRBP28702 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
RXRBP28702 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
RXRBP28702 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC19.56■□□□□ 0.72
RXRBP28702 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RXRBP28702 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RXRBP28702 PCBD1-201ENST00000299299 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RXRBP28702 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC19.56■□□□□ 0.72
RXRBP28702 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RXRBP28702 AC006372.2-201ENST00000433660 292 ntTSL 3 BASIC19.56■□□□□ 0.72
RXRBP28702 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RXRBP28702 CICP12-201ENST00000455801 843 ntBASIC19.56■□□□□ 0.72
RXRBP28702 BPIFB5P-201ENST00000457066 1099 ntBASIC19.56■□□□□ 0.72
RXRBP28702 AL928742.1-201ENST00000497397 548 ntTSL 4 BASIC19.56■□□□□ 0.72
RXRBP28702 RNA5SP406-201ENST00000516106 112 ntBASIC19.56■□□□□ 0.72
RXRBP28702 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC19.56■□□□□ 0.72
RXRBP28702 AC009163.5-202ENST00000571737 466 ntTSL 3 BASIC19.56■□□□□ 0.72
RXRBP28702 AC080013.5-201ENST00000607044 679 ntBASIC19.56■□□□□ 0.72
RXRBP28702 AL450487.2-201ENST00000615934 407 ntBASIC19.56■□□□□ 0.72
RXRBP28702 AC020922.4-201ENST00000621389 339 ntBASIC19.56■□□□□ 0.72
RXRBP28702 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
RXRBP28702 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RXRBP28702 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RXRBP28702 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
RXRBP28702 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
RXRBP28702 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RXRBP28702 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC19.56■□□□□ 0.72
RXRBP28702 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC19.56■□□□□ 0.72
RXRBP28702 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
RXRBP28702 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC19.56■□□□□ 0.72
RXRBP28702 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RXRBP28702 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC19.55■□□□□ 0.72
RXRBP28702 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RXRBP28702 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RXRBP28702 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RXRBP28702 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RXRBP28702 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
RXRBP28702 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RXRBP28702 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC19.55■□□□□ 0.72
RXRBP28702 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RXRBP28702 COLQ-202ENST00000383786 1482 ntTSL 5 BASIC19.55■□□□□ 0.72
RXRBP28702 AC012508.2-201ENST00000567613 1472 ntBASIC19.55■□□□□ 0.72
RXRBP28702 CR382285.1-201ENST00000625012 1485 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RXRBP28702 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC19.55■□□□□ 0.72
RXRBP28702 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RXRBP28702 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RXRBP28702 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.55■□□□□ 0.72
RXRBP28702 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RXRBP28702 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
RXRBP28702 TEX33-201ENST00000381821 978 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
RXRBP28702 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RXRBP28702 SERF2-209ENST00000409646 559 ntTSL 4 BASIC19.55■□□□□ 0.72
RXRBP28702 TPRKB-203ENST00000409716 816 ntTSL 5 BASIC19.55■□□□□ 0.72
RXRBP28702 KRT8P30-201ENST00000432100 650 ntBASIC19.55■□□□□ 0.72
RXRBP28702 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RXRBP28702 CTB-178M22.2-201ENST00000519795 503 ntTSL 4 BASIC19.55■□□□□ 0.72
RXRBP28702 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
RXRBP28702 C11orf58-207ENST00000525684 575 ntTSL 2 BASIC19.55■□□□□ 0.72
RXRBP28702 C11orf58-209ENST00000528634 776 ntTSL 5 BASIC19.55■□□□□ 0.72
RXRBP28702 LAMTOR1-208ENST00000545249 965 ntTSL 3 BASIC19.55■□□□□ 0.72
RXRBP28702 TRAPPC2L-212ENST00000567312 499 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RXRBP28702 APOC1-209ENST00000592885 562 ntTSL 3 BASIC19.55■□□□□ 0.72
RXRBP28702 AC008972.2-201ENST00000606587 494 ntBASIC19.55■□□□□ 0.72
RXRBP28702 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC19.55■□□□□ 0.72
RXRBP28702 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RXRBP28702 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RXRBP28702 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC19.55■□□□□ 0.72
RXRBP28702 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RXRBP28702 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC19.55■□□□□ 0.72
RXRBP28702 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC19.55■□□□□ 0.72
RXRBP28702 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC19.55■□□□□ 0.72
RXRBP28702 RBFOX3-203ENST00000580155 1519 ntAPPRIS P2 TSL 2 BASIC19.55■□□□□ 0.72
RXRBP28702 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms