Protein–RNA interactions for Protein: P23942

PRPH2, Peripherin-2, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPH2P23942 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PRPH2P23942 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC14.6□□□□□ -0.07
PRPH2P23942 DUX4L27-201ENST00000554796 1261 ntBASIC14.6□□□□□ -0.07
PRPH2P23942 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC14.6□□□□□ -0.07
PRPH2P23942 AC036164.1-201ENST00000570544 333 ntBASIC14.6□□□□□ -0.07
PRPH2P23942 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC14.6□□□□□ -0.07
PRPH2P23942 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
PRPH2P23942 AC008738.7-201ENST00000609744 511 ntBASIC14.6□□□□□ -0.07
PRPH2P23942 AC138649.4-201ENST00000612222 287 ntBASIC14.6□□□□□ -0.07
PRPH2P23942 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
PRPH2P23942 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
PRPH2P23942 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PRPH2P23942 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC14.6□□□□□ -0.07
PRPH2P23942 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
PRPH2P23942 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC14.6□□□□□ -0.07
PRPH2P23942 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
PRPH2P23942 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PRPH2P23942 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
PRPH2P23942 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
PRPH2P23942 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.6□□□□□ -0.07
PRPH2P23942 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PRPH2P23942 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PRPH2P23942 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
PRPH2P23942 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC14.6□□□□□ -0.07
PRPH2P23942 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
PRPH2P23942 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC14.6□□□□□ -0.07
PRPH2P23942 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PRPH2P23942 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC14.6□□□□□ -0.07
PRPH2P23942 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
PRPH2P23942 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PRPH2P23942 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PRPH2P23942 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC14.6□□□□□ -0.07
PRPH2P23942 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
PRPH2P23942 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PRPH2P23942 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PRPH2P23942 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC14.6□□□□□ -0.07
PRPH2P23942 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PRPH2P23942 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PRPH2P23942 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
PRPH2P23942 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
PRPH2P23942 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
PRPH2P23942 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PRPH2P23942 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC14.59□□□□□ -0.07
PRPH2P23942 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.59□□□□□ -0.07
PRPH2P23942 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PRPH2P23942 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC14.59□□□□□ -0.07
PRPH2P23942 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PRPH2P23942 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC14.59□□□□□ -0.07
PRPH2P23942 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PRPH2P23942 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
PRPH2P23942 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC14.59□□□□□ -0.07
PRPH2P23942 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
PRPH2P23942 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC14.59□□□□□ -0.07
PRPH2P23942 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PRPH2P23942 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
PRPH2P23942 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
PRPH2P23942 GRK6P1-201ENST00000400595 1711 ntBASIC14.59□□□□□ -0.07
PRPH2P23942 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PRPH2P23942 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
PRPH2P23942 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC14.59□□□□□ -0.07
PRPH2P23942 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
PRPH2P23942 FAM86LP-201ENST00000478302 853 ntBASIC14.59□□□□□ -0.07
PRPH2P23942 IGHV3-42-201ENST00000520410 361 ntBASIC14.59□□□□□ -0.07
PRPH2P23942 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC14.59□□□□□ -0.07
PRPH2P23942 AC135586.1-201ENST00000539323 574 ntBASIC14.59□□□□□ -0.07
PRPH2P23942 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC14.59□□□□□ -0.07
PRPH2P23942 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC14.59□□□□□ -0.07
PRPH2P23942 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
PRPH2P23942 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PRPH2P23942 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC14.59□□□□□ -0.07
PRPH2P23942 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PRPH2P23942 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
PRPH2P23942 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC14.59□□□□□ -0.07
PRPH2P23942 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PRPH2P23942 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
PRPH2P23942 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
PRPH2P23942 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC14.59□□□□□ -0.07
PRPH2P23942 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
PRPH2P23942 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
PRPH2P23942 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
PRPH2P23942 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PRPH2P23942 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC14.59□□□□□ -0.07
PRPH2P23942 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PRPH2P23942 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC14.59□□□□□ -0.07
PRPH2P23942 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC14.59□□□□□ -0.07
PRPH2P23942 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
PRPH2P23942 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
PRPH2P23942 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.07
PRPH2P23942 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
PRPH2P23942 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
PRPH2P23942 AL138799.1-201ENST00000448213 1675 ntBASIC14.58□□□□□ -0.07
PRPH2P23942 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
PRPH2P23942 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
PRPH2P23942 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.07
PRPH2P23942 AL157414.3-201ENST00000624276 1954 ntBASIC14.58□□□□□ -0.07
PRPH2P23942 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
PRPH2P23942 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
PRPH2P23942 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PRPH2P23942 AC068418.2-201ENST00000577309 3703 ntBASIC14.58□□□□□ -0.08
PRPH2P23942 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms