Protein–RNA interactions for Protein: P20783

NTF3, Neurotrophin-3, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NTF3P20783 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
NTF3P20783 LINC00865-202ENST00000448963 4272 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
NTF3P20783 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
NTF3P20783 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
NTF3P20783 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC11.79□□□□□ -0.52
NTF3P20783 ATE1-208ENST00000540606 5165 ntTSL 2 BASIC11.79□□□□□ -0.52
NTF3P20783 ADCY7-202ENST00000394697 6213 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
NTF3P20783 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC11.79□□□□□ -0.52
NTF3P20783 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
NTF3P20783 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
NTF3P20783 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
NTF3P20783 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
NTF3P20783 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
NTF3P20783 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
NTF3P20783 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
NTF3P20783 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC11.79□□□□□ -0.52
NTF3P20783 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC11.79□□□□□ -0.52
NTF3P20783 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC11.79□□□□□ -0.52
NTF3P20783 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
NTF3P20783 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
NTF3P20783 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC11.79□□□□□ -0.52
NTF3P20783 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC11.79□□□□□ -0.52
NTF3P20783 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC11.79□□□□□ -0.52
NTF3P20783 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC11.79□□□□□ -0.52
NTF3P20783 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC11.79□□□□□ -0.52
NTF3P20783 AC138894.3-201ENST00000603787 634 ntBASIC11.79□□□□□ -0.52
NTF3P20783 AC069148.1-201ENST00000608741 768 ntBASIC11.79□□□□□ -0.52
NTF3P20783 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC11.79□□□□□ -0.52
NTF3P20783 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC11.79□□□□□ -0.52
NTF3P20783 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
NTF3P20783 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
NTF3P20783 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
NTF3P20783 HSPA7-201ENST00000445535 1927 ntBASIC11.79□□□□□ -0.52
NTF3P20783 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
NTF3P20783 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
NTF3P20783 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
NTF3P20783 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
NTF3P20783 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
NTF3P20783 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC11.79□□□□□ -0.52
NTF3P20783 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
NTF3P20783 FAM193A-201ENST00000324666 4846 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
NTF3P20783 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
NTF3P20783 ILF3-AS1-201ENST00000591501 1983 ntBASIC11.79□□□□□ -0.52
NTF3P20783 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
NTF3P20783 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
NTF3P20783 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC11.79□□□□□ -0.52
NTF3P20783 SULF1-202ENST00000402687 4891 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
NTF3P20783 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
NTF3P20783 AC089987.1-201ENST00000551654 2209 ntBASIC11.79□□□□□ -0.52
NTF3P20783 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC11.79□□□□□ -0.52
NTF3P20783 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC11.78□□□□□ -0.52
NTF3P20783 AC118758.2-201ENST00000614242 2813 ntBASIC11.78□□□□□ -0.52
NTF3P20783 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
NTF3P20783 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
NTF3P20783 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
NTF3P20783 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC11.78□□□□□ -0.52
NTF3P20783 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
NTF3P20783 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
NTF3P20783 MEX3B-202ENST00000558133 4333 ntBASIC11.78□□□□□ -0.52
NTF3P20783 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC11.78□□□□□ -0.52
NTF3P20783 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
NTF3P20783 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC11.78□□□□□ -0.52
NTF3P20783 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
NTF3P20783 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
NTF3P20783 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
NTF3P20783 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
NTF3P20783 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC11.78□□□□□ -0.52
NTF3P20783 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC11.78□□□□□ -0.52
NTF3P20783 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC11.78□□□□□ -0.52
NTF3P20783 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC11.78□□□□□ -0.52
NTF3P20783 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
NTF3P20783 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
NTF3P20783 CR383656.2-201ENST00000548656 2254 ntBASIC11.78□□□□□ -0.52
NTF3P20783 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
NTF3P20783 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
NTF3P20783 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
NTF3P20783 BET1L-202ENST00000332865 533 ntTSL 5 BASIC11.78□□□□□ -0.52
NTF3P20783 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC11.78□□□□□ -0.52
NTF3P20783 PCED1CP-201ENST00000419887 785 ntBASIC11.78□□□□□ -0.52
NTF3P20783 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC11.78□□□□□ -0.52
NTF3P20783 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC11.78□□□□□ -0.52
NTF3P20783 EHF-205ENST00000527935 557 ntTSL 2 BASIC11.78□□□□□ -0.52
NTF3P20783 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
NTF3P20783 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC11.78□□□□□ -0.52
NTF3P20783 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC11.78□□□□□ -0.52
NTF3P20783 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC11.78□□□□□ -0.52
NTF3P20783 RN7SL850P-201ENST00000579959 291 ntBASIC11.78□□□□□ -0.52
NTF3P20783 IGHV3OR16-7-201ENST00000604106 360 ntBASIC11.78□□□□□ -0.52
NTF3P20783 AC091076.1-201ENST00000610741 619 ntBASIC11.78□□□□□ -0.52
NTF3P20783 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC11.78□□□□□ -0.52
NTF3P20783 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
NTF3P20783 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
NTF3P20783 ANTXR2-203ENST00000403729 8273 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
NTF3P20783 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
NTF3P20783 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC11.78□□□□□ -0.52
NTF3P20783 HPS3-201ENST00000296051 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
NTF3P20783 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
NTF3P20783 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC11.78□□□□□ -0.52
NTF3P20783 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC11.78□□□□□ -0.52
NTF3P20783 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms