Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC16.15■□□□□ 0.18
PDGFRAP16234 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC16.15■□□□□ 0.18
PDGFRAP16234 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC16.15■□□□□ 0.18
PDGFRAP16234 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC16.14■□□□□ 0.18
PDGFRAP16234 AL161772.1-201ENST00000610494 4412 ntBASIC16.14■□□□□ 0.17
PDGFRAP16234 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PDGFRAP16234 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PDGFRAP16234 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PDGFRAP16234 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC16.14■□□□□ 0.17
PDGFRAP16234 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PDGFRAP16234 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PDGFRAP16234 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PDGFRAP16234 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
PDGFRAP16234 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC16.14■□□□□ 0.17
PDGFRAP16234 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PDGFRAP16234 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
PDGFRAP16234 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PDGFRAP16234 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PDGFRAP16234 DGCR5-201ENST00000399539 862 ntBASIC16.14■□□□□ 0.17
PDGFRAP16234 AC104457.1-201ENST00000401024 814 ntBASIC16.14■□□□□ 0.17
PDGFRAP16234 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC16.14■□□□□ 0.17
PDGFRAP16234 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC16.14■□□□□ 0.17
PDGFRAP16234 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PDGFRAP16234 AC104596.2-201ENST00000512793 793 ntBASIC16.14■□□□□ 0.17
PDGFRAP16234 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC16.14■□□□□ 0.17
PDGFRAP16234 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC16.14■□□□□ 0.17
PDGFRAP16234 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
PDGFRAP16234 AC123567.1-201ENST00000548294 1261 ntBASIC16.14■□□□□ 0.17
PDGFRAP16234 AC005225.4-201ENST00000557330 545 ntBASIC16.14■□□□□ 0.17
PDGFRAP16234 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC16.14■□□□□ 0.17
PDGFRAP16234 AP000845.1-201ENST00000581677 2131 ntBASIC16.14■□□□□ 0.17
PDGFRAP16234 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC16.14■□□□□ 0.17
PDGFRAP16234 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC16.14■□□□□ 0.17
PDGFRAP16234 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
PDGFRAP16234 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PDGFRAP16234 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC16.14■□□□□ 0.17
PDGFRAP16234 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
PDGFRAP16234 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
PDGFRAP16234 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
PDGFRAP16234 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC16.14■□□□□ 0.17
PDGFRAP16234 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PDGFRAP16234 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PDGFRAP16234 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
PDGFRAP16234 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC16.14■□□□□ 0.17
PDGFRAP16234 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PDGFRAP16234 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC16.14■□□□□ 0.17
PDGFRAP16234 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
PDGFRAP16234 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PDGFRAP16234 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
PDGFRAP16234 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PDGFRAP16234 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PDGFRAP16234 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PDGFRAP16234 ZBED1P1-201ENST00000502364 1930 ntBASIC16.13■□□□□ 0.17
PDGFRAP16234 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PDGFRAP16234 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC16.13■□□□□ 0.17
PDGFRAP16234 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PDGFRAP16234 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PDGFRAP16234 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PDGFRAP16234 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
PDGFRAP16234 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PDGFRAP16234 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
PDGFRAP16234 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PDGFRAP16234 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
PDGFRAP16234 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PDGFRAP16234 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PDGFRAP16234 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
PDGFRAP16234 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PDGFRAP16234 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC16.13■□□□□ 0.17
PDGFRAP16234 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PDGFRAP16234 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PDGFRAP16234 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PDGFRAP16234 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
PDGFRAP16234 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC16.13■□□□□ 0.17
PDGFRAP16234 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC16.13■□□□□ 0.17
PDGFRAP16234 AC098850.1-201ENST00000419919 790 ntBASIC16.13■□□□□ 0.17
PDGFRAP16234 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PDGFRAP16234 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PDGFRAP16234 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PDGFRAP16234 MYCLP2-201ENST00000449268 967 ntBASIC16.13■□□□□ 0.17
PDGFRAP16234 VDAC1P7-201ENST00000462417 847 ntBASIC16.13■□□□□ 0.17
PDGFRAP16234 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC16.13■□□□□ 0.17
PDGFRAP16234 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC16.13■□□□□ 0.17
PDGFRAP16234 RPL13AP25-201ENST00000484130 612 ntBASIC16.13■□□□□ 0.17
PDGFRAP16234 AC026410.3-201ENST00000514280 936 ntBASIC16.13■□□□□ 0.17
PDGFRAP16234 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC16.13■□□□□ 0.17
PDGFRAP16234 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC16.13■□□□□ 0.17
PDGFRAP16234 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC16.13■□□□□ 0.17
PDGFRAP16234 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC16.13■□□□□ 0.17
PDGFRAP16234 AL596325.1-201ENST00000563991 1082 ntBASIC16.13■□□□□ 0.17
PDGFRAP16234 SAMD11P1-201ENST00000571429 661 ntBASIC16.13■□□□□ 0.17
PDGFRAP16234 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC16.13■□□□□ 0.17
PDGFRAP16234 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PDGFRAP16234 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC16.13■□□□□ 0.17
PDGFRAP16234 AC093726.1-201ENST00000608064 963 ntBASIC16.13■□□□□ 0.17
PDGFRAP16234 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC16.13■□□□□ 0.17
PDGFRAP16234 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC16.13■□□□□ 0.17
PDGFRAP16234 AC012508.2-201ENST00000567613 1472 ntBASIC16.13■□□□□ 0.17
PDGFRAP16234 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
PDGFRAP16234 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
PDGFRAP16234 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms