Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
TOP2AP11388 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC26.14■■□□□ 1.77
TOP2AP11388 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC26.14■■□□□ 1.77
TOP2AP11388 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC26.14■■□□□ 1.77
TOP2AP11388 PFN2-206ENST00000461930 606 ntTSL 4 BASIC26.14■■□□□ 1.77
TOP2AP11388 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC26.14■■□□□ 1.77
TOP2AP11388 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC26.14■■□□□ 1.77
TOP2AP11388 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
TOP2AP11388 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC26.14■■□□□ 1.77
TOP2AP11388 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
TOP2AP11388 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC26.14■■□□□ 1.77
TOP2AP11388 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
TOP2AP11388 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
TOP2AP11388 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC26.13■■□□□ 1.77
TOP2AP11388 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
TOP2AP11388 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC26.13■■□□□ 1.77
TOP2AP11388 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC26.13■■□□□ 1.77
TOP2AP11388 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC26.13■■□□□ 1.77
TOP2AP11388 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
TOP2AP11388 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
TOP2AP11388 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC26.13■■□□□ 1.77
TOP2AP11388 REXO1L2P-201ENST00000425429 2069 ntBASIC26.13■■□□□ 1.77
TOP2AP11388 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC26.13■■□□□ 1.77
TOP2AP11388 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC26.13■■□□□ 1.77
TOP2AP11388 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
TOP2AP11388 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
TOP2AP11388 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC26.13■■□□□ 1.77
TOP2AP11388 ORAOV1P1-201ENST00000503108 395 ntBASIC26.13■■□□□ 1.77
TOP2AP11388 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC26.13■■□□□ 1.77
TOP2AP11388 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC26.13■■□□□ 1.77
TOP2AP11388 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC26.13■■□□□ 1.77
TOP2AP11388 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC26.13■■□□□ 1.77
TOP2AP11388 AC084781.1-201ENST00000613737 656 ntBASIC26.13■■□□□ 1.77
TOP2AP11388 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC26.13■■□□□ 1.77
TOP2AP11388 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC26.13■■□□□ 1.77
TOP2AP11388 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC26.13■■□□□ 1.77
TOP2AP11388 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC26.13■■□□□ 1.77
TOP2AP11388 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC26.13■■□□□ 1.77
TOP2AP11388 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
TOP2AP11388 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC26.13■■□□□ 1.77
TOP2AP11388 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC26.13■■□□□ 1.77
TOP2AP11388 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC26.12■■□□□ 1.77
TOP2AP11388 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
TOP2AP11388 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
TOP2AP11388 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
TOP2AP11388 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
TOP2AP11388 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC26.12■■□□□ 1.77
TOP2AP11388 MBP-201ENST00000354542 575 ntTSL 2 BASIC26.12■■□□□ 1.77
TOP2AP11388 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
TOP2AP11388 AL583805.1-201ENST00000391389 531 ntBASIC26.12■■□□□ 1.77
TOP2AP11388 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC26.12■■□□□ 1.77
TOP2AP11388 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC26.12■■□□□ 1.77
TOP2AP11388 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
TOP2AP11388 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC26.12■■□□□ 1.77
TOP2AP11388 AC025262.2-201ENST00000623975 1056 ntBASIC26.12■■□□□ 1.77
TOP2AP11388 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
TOP2AP11388 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
TOP2AP11388 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
TOP2AP11388 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC26.12■■□□□ 1.77
TOP2AP11388 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
TOP2AP11388 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC26.12■■□□□ 1.77
TOP2AP11388 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC26.11■■□□□ 1.77
TOP2AP11388 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC26.11■■□□□ 1.77
TOP2AP11388 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC26.11■■□□□ 1.77
TOP2AP11388 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC26.11■■□□□ 1.77
TOP2AP11388 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC26.11■■□□□ 1.77
TOP2AP11388 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
TOP2AP11388 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
TOP2AP11388 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC26.11■■□□□ 1.77
TOP2AP11388 BID-213ENST00000615414 2236 ntTSL 5 BASIC26.11■■□□□ 1.77
TOP2AP11388 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
TOP2AP11388 DUTP3-201ENST00000450025 415 ntBASIC26.11■■□□□ 1.77
TOP2AP11388 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
TOP2AP11388 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC26.11■■□□□ 1.77
TOP2AP11388 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC26.11■■□□□ 1.77
TOP2AP11388 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC26.11■■□□□ 1.77
TOP2AP11388 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC26.11■■□□□ 1.77
TOP2AP11388 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC26.11■■□□□ 1.77
TOP2AP11388 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
TOP2AP11388 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC26.11■■□□□ 1.77
TOP2AP11388 AL391005.1-201ENST00000623953 2435 ntBASIC26.11■■□□□ 1.77
TOP2AP11388 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC26.11■■□□□ 1.77
TOP2AP11388 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC26.11■■□□□ 1.77
TOP2AP11388 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC26.11■■□□□ 1.77
TOP2AP11388 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC26.1■■□□□ 1.77
TOP2AP11388 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
TOP2AP11388 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC26.1■■□□□ 1.77
TOP2AP11388 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC26.1■■□□□ 1.77
TOP2AP11388 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
TOP2AP11388 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC26.1■■□□□ 1.77
TOP2AP11388 TSPY25P-201ENST00000429463 745 ntBASIC26.1■■□□□ 1.77
TOP2AP11388 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC26.1■■□□□ 1.77
TOP2AP11388 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC26.1■■□□□ 1.77
TOP2AP11388 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
TOP2AP11388 FTH1P22-201ENST00000456305 520 ntBASIC26.1■■□□□ 1.77
TOP2AP11388 AC103810.10-201ENST00000606504 343 ntBASIC26.1■■□□□ 1.77
TOP2AP11388 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC26.1■■□□□ 1.77
TOP2AP11388 AC020658.6-201ENST00000623564 1870 ntBASIC26.1■■□□□ 1.77
TOP2AP11388 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC26.1■■□□□ 1.77
TOP2AP11388 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms