Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC15.57■□□□□ 0.08
HLA-DQB2P05538 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
HLA-DQB2P05538 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC15.57■□□□□ 0.08
HLA-DQB2P05538 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC15.57■□□□□ 0.08
HLA-DQB2P05538 AP001582.1-201ENST00000525856 295 ntBASIC15.57■□□□□ 0.08
HLA-DQB2P05538 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC15.57■□□□□ 0.08
HLA-DQB2P05538 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC15.57■□□□□ 0.08
HLA-DQB2P05538 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC15.57■□□□□ 0.08
HLA-DQB2P05538 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC15.57■□□□□ 0.08
HLA-DQB2P05538 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
HLA-DQB2P05538 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC15.57■□□□□ 0.08
HLA-DQB2P05538 AC133539.2-201ENST00000604757 467 ntBASIC15.57■□□□□ 0.08
HLA-DQB2P05538 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
HLA-DQB2P05538 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC15.57■□□□□ 0.08
HLA-DQB2P05538 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HLA-DQB2P05538 AL360270.3-201ENST00000609118 1348 ntBASIC15.57■□□□□ 0.08
HLA-DQB2P05538 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
HLA-DQB2P05538 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
HLA-DQB2P05538 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC15.57■□□□□ 0.08
HLA-DQB2P05538 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
HLA-DQB2P05538 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HLA-DQB2P05538 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
HLA-DQB2P05538 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
HLA-DQB2P05538 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HLA-DQB2P05538 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
HLA-DQB2P05538 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
HLA-DQB2P05538 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC15.57■□□□□ 0.08
HLA-DQB2P05538 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
HLA-DQB2P05538 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
HLA-DQB2P05538 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HLA-DQB2P05538 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC15.57■□□□□ 0.08
HLA-DQB2P05538 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
HLA-DQB2P05538 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
HLA-DQB2P05538 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HLA-DQB2P05538 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HLA-DQB2P05538 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
HLA-DQB2P05538 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
HLA-DQB2P05538 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HLA-DQB2P05538 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
HLA-DQB2P05538 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC15.56■□□□□ 0.08
HLA-DQB2P05538 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC15.56■□□□□ 0.08
HLA-DQB2P05538 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
HLA-DQB2P05538 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC15.56■□□□□ 0.08
HLA-DQB2P05538 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
HLA-DQB2P05538 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HLA-DQB2P05538 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HLA-DQB2P05538 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HLA-DQB2P05538 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
HLA-DQB2P05538 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.56■□□□□ 0.08
HLA-DQB2P05538 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HLA-DQB2P05538 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HLA-DQB2P05538 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HLA-DQB2P05538 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HLA-DQB2P05538 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC15.56■□□□□ 0.08
HLA-DQB2P05538 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HLA-DQB2P05538 HLA-K-203ENST00000430151 1046 ntBASIC15.56■□□□□ 0.08
HLA-DQB2P05538 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC15.56■□□□□ 0.08
HLA-DQB2P05538 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC15.56■□□□□ 0.08
HLA-DQB2P05538 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
HLA-DQB2P05538 PAM16-204ENST00000571941 674 ntTSL 3 BASIC15.56■□□□□ 0.08
HLA-DQB2P05538 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC15.56■□□□□ 0.08
HLA-DQB2P05538 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC15.56■□□□□ 0.08
HLA-DQB2P05538 BX539320.1-201ENST00000623759 877 ntBASIC15.56■□□□□ 0.08
HLA-DQB2P05538 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HLA-DQB2P05538 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC15.56■□□□□ 0.08
HLA-DQB2P05538 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
HLA-DQB2P05538 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC15.56■□□□□ 0.08
HLA-DQB2P05538 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
HLA-DQB2P05538 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
HLA-DQB2P05538 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC15.56■□□□□ 0.08
HLA-DQB2P05538 GPI-205ENST00000586425 1799 ntTSL 5 BASIC15.56■□□□□ 0.08
HLA-DQB2P05538 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
HLA-DQB2P05538 REXO1L5P-201ENST00000622260 2098 ntBASIC15.56■□□□□ 0.08
HLA-DQB2P05538 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC15.56■□□□□ 0.08
HLA-DQB2P05538 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
HLA-DQB2P05538 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
HLA-DQB2P05538 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
HLA-DQB2P05538 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
HLA-DQB2P05538 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HLA-DQB2P05538 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC15.56■□□□□ 0.08
HLA-DQB2P05538 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
HLA-DQB2P05538 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC15.56■□□□□ 0.08
HLA-DQB2P05538 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HLA-DQB2P05538 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HLA-DQB2P05538 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
HLA-DQB2P05538 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
HLA-DQB2P05538 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
HLA-DQB2P05538 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HLA-DQB2P05538 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
HLA-DQB2P05538 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HLA-DQB2P05538 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC15.55■□□□□ 0.08
HLA-DQB2P05538 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
HLA-DQB2P05538 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
HLA-DQB2P05538 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HLA-DQB2P05538 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HLA-DQB2P05538 PES1-204ENST00000402284 2144 ntTSL 5 BASIC15.55■□□□□ 0.08
HLA-DQB2P05538 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HLA-DQB2P05538 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HLA-DQB2P05538 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HLA-DQB2P05538 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms