Protein–RNA interactions for Protein: P04626

ERBB2, Receptor tyrosine-protein kinase erbB-2, humanhuman

Predictions only

Length 1,255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2P04626 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC16.13■□□□□ 0.17
ERBB2P04626 CALY-203ENST00000368558 825 ntTSL 5 BASIC16.13■□□□□ 0.17
ERBB2P04626 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ERBB2P04626 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ERBB2P04626 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC16.13■□□□□ 0.17
ERBB2P04626 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ERBB2P04626 HLA-K-203ENST00000430151 1046 ntBASIC16.13■□□□□ 0.17
ERBB2P04626 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC16.13■□□□□ 0.17
ERBB2P04626 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC16.13■□□□□ 0.17
ERBB2P04626 AP001582.1-201ENST00000525856 295 ntBASIC16.13■□□□□ 0.17
ERBB2P04626 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC16.13■□□□□ 0.17
ERBB2P04626 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC16.13■□□□□ 0.17
ERBB2P04626 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ERBB2P04626 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC16.13■□□□□ 0.17
ERBB2P04626 PAM16-204ENST00000571941 674 ntTSL 3 BASIC16.13■□□□□ 0.17
ERBB2P04626 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC16.13■□□□□ 0.17
ERBB2P04626 AC133539.2-201ENST00000604757 467 ntBASIC16.13■□□□□ 0.17
ERBB2P04626 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ERBB2P04626 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
ERBB2P04626 REXO1L5P-201ENST00000622260 2098 ntBASIC16.13■□□□□ 0.17
ERBB2P04626 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ERBB2P04626 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ERBB2P04626 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ERBB2P04626 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
ERBB2P04626 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ERBB2P04626 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ERBB2P04626 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ERBB2P04626 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
ERBB2P04626 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
ERBB2P04626 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC16.13■□□□□ 0.17
ERBB2P04626 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ERBB2P04626 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC16.13■□□□□ 0.17
ERBB2P04626 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
ERBB2P04626 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ERBB2P04626 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC16.13■□□□□ 0.17
ERBB2P04626 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC16.12■□□□□ 0.17
ERBB2P04626 CICP24-201ENST00000605464 2705 ntBASIC16.12■□□□□ 0.17
ERBB2P04626 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ERBB2P04626 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ERBB2P04626 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ERBB2P04626 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ERBB2P04626 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC16.12■□□□□ 0.17
ERBB2P04626 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ERBB2P04626 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC16.12■□□□□ 0.17
ERBB2P04626 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
ERBB2P04626 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
ERBB2P04626 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ERBB2P04626 AGER-206ENST00000375070 1463 ntTSL 5 BASIC16.12■□□□□ 0.17
ERBB2P04626 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ERBB2P04626 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ERBB2P04626 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ERBB2P04626 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ERBB2P04626 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
ERBB2P04626 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC16.12■□□□□ 0.17
ERBB2P04626 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC16.12■□□□□ 0.17
ERBB2P04626 LHX6-205ENST00000464484 666 ntTSL 2 BASIC16.12■□□□□ 0.17
ERBB2P04626 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC16.12■□□□□ 0.17
ERBB2P04626 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ERBB2P04626 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ERBB2P04626 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC16.12■□□□□ 0.17
ERBB2P04626 IFT20-206ENST00000578122 834 ntTSL 2 BASIC16.12■□□□□ 0.17
ERBB2P04626 IFT20-208ENST00000578985 831 ntTSL 3 BASIC16.12■□□□□ 0.17
ERBB2P04626 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC16.12■□□□□ 0.17
ERBB2P04626 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
ERBB2P04626 AC005252.2-201ENST00000624630 1141 ntBASIC16.12■□□□□ 0.17
ERBB2P04626 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ERBB2P04626 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ERBB2P04626 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ERBB2P04626 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
ERBB2P04626 GPI-205ENST00000586425 1799 ntTSL 5 BASIC16.12■□□□□ 0.17
ERBB2P04626 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ERBB2P04626 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
ERBB2P04626 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ERBB2P04626 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ERBB2P04626 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ERBB2P04626 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
ERBB2P04626 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC16.11■□□□□ 0.17
ERBB2P04626 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ERBB2P04626 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ERBB2P04626 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
ERBB2P04626 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ERBB2P04626 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
ERBB2P04626 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ERBB2P04626 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
ERBB2P04626 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC16.11■□□□□ 0.17
ERBB2P04626 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ERBB2P04626 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
ERBB2P04626 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ERBB2P04626 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ERBB2P04626 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ERBB2P04626 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
ERBB2P04626 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ERBB2P04626 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ERBB2P04626 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
ERBB2P04626 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ERBB2P04626 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ERBB2P04626 NSL1-201ENST00000366976 722 ntTSL 2 BASIC16.11■□□□□ 0.17
ERBB2P04626 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
ERBB2P04626 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC16.11■□□□□ 0.17
ERBB2P04626 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 120 ms