Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC9.27□□□□□ -0.93
APOBP04114 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
APOBP04114 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC9.27□□□□□ -0.93
APOBP04114 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
APOBP04114 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
APOBP04114 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC9.27□□□□□ -0.93
APOBP04114 AC093673.1-201ENST00000429630 648 ntTSL 2 BASIC9.27□□□□□ -0.93
APOBP04114 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC9.27□□□□□ -0.93
APOBP04114 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC9.27□□□□□ -0.93
APOBP04114 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC9.27□□□□□ -0.93
APOBP04114 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC9.27□□□□□ -0.93
APOBP04114 CD79B-201ENST00000006750 1269 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
APOBP04114 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC9.27□□□□□ -0.93
APOBP04114 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
APOBP04114 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC9.27□□□□□ -0.93
APOBP04114 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC9.27□□□□□ -0.93
APOBP04114 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC9.26□□□□□ -0.93
APOBP04114 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC9.26□□□□□ -0.93
APOBP04114 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC9.26□□□□□ -0.93
APOBP04114 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
APOBP04114 RBM14-204ENST00000409738 372 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
APOBP04114 HDAC2-AS2-203ENST00000436876 591 ntTSL 5 BASIC9.26□□□□□ -0.93
APOBP04114 AC092638.2-201ENST00000441105 947 ntBASIC9.26□□□□□ -0.93
APOBP04114 SRP14-204ENST00000558720 780 ntTSL 2 BASIC9.26□□□□□ -0.93
APOBP04114 MYOZ3-209ENST00000615557 1031 ntTSL 2 BASIC9.26□□□□□ -0.93
APOBP04114 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
APOBP04114 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC9.26□□□□□ -0.93
APOBP04114 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
APOBP04114 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC9.26□□□□□ -0.93
APOBP04114 FRMD6-AS1-201ENST00000617151 2229 ntBASIC9.26□□□□□ -0.93
APOBP04114 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC9.26□□□□□ -0.93
APOBP04114 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC9.26□□□□□ -0.93
APOBP04114 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC9.26□□□□□ -0.93
APOBP04114 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC9.26□□□□□ -0.93
APOBP04114 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC9.26□□□□□ -0.93
APOBP04114 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
APOBP04114 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC9.26□□□□□ -0.93
APOBP04114 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
APOBP04114 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
APOBP04114 FAM3B-201ENST00000357985 1088 ntAPPRIS P3 TSL 1 (best) BASIC9.26□□□□□ -0.93
APOBP04114 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
APOBP04114 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
APOBP04114 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
APOBP04114 TIMM17B-204ENST00000465150 964 ntTSL 2 BASIC9.26□□□□□ -0.93
APOBP04114 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC9.26□□□□□ -0.93
APOBP04114 AC003686.1-201ENST00000550956 1034 ntBASIC9.26□□□□□ -0.93
APOBP04114 AC010504.1-201ENST00000591311 585 ntTSL 3 BASIC9.26□□□□□ -0.93
APOBP04114 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
APOBP04114 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC9.26□□□□□ -0.93
APOBP04114 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
APOBP04114 MTHFR-217ENST00000641820 1569 ntBASIC9.26□□□□□ -0.93
APOBP04114 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
APOBP04114 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC9.26□□□□□ -0.93
APOBP04114 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC9.26□□□□□ -0.93
APOBP04114 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
APOBP04114 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC9.26□□□□□ -0.93
APOBP04114 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
APOBP04114 EIF5A2-205ENST00000487522 565 ntTSL 3 BASIC9.26□□□□□ -0.93
APOBP04114 AC127383.1-201ENST00000444697 1800 ntBASIC9.26□□□□□ -0.93
APOBP04114 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
APOBP04114 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
APOBP04114 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
APOBP04114 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
APOBP04114 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC9.26□□□□□ -0.93
APOBP04114 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
APOBP04114 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
APOBP04114 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC9.26□□□□□ -0.93
APOBP04114 BANF1P3-201ENST00000412556 261 ntBASIC9.26□□□□□ -0.93
APOBP04114 CDC23-208ENST00000505120 455 ntTSL 3 BASIC9.26□□□□□ -0.93
APOBP04114 PRB3-202ENST00000538488 1283 ntAPPRIS P5 TSL 5 BASIC9.26□□□□□ -0.93
APOBP04114 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC9.26□□□□□ -0.93
APOBP04114 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC9.26□□□□□ -0.93
APOBP04114 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
APOBP04114 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
APOBP04114 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
APOBP04114 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
APOBP04114 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
APOBP04114 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
APOBP04114 CRYBB3-201ENST00000215855 867 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
APOBP04114 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC9.25□□□□□ -0.93
APOBP04114 CELP-201ENST00000411440 1249 ntTSL 5 BASIC9.25□□□□□ -0.93
APOBP04114 KRT18P36-201ENST00000411618 1276 ntBASIC9.25□□□□□ -0.93
APOBP04114 LINC01983-201ENST00000413586 574 ntTSL 2 BASIC9.25□□□□□ -0.93
APOBP04114 XBP1P1-201ENST00000436573 652 ntBASIC9.25□□□□□ -0.93
APOBP04114 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
APOBP04114 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
APOBP04114 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC9.25□□□□□ -0.93
APOBP04114 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
APOBP04114 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
APOBP04114 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC9.25□□□□□ -0.93
APOBP04114 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
APOBP04114 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
APOBP04114 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
APOBP04114 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
APOBP04114 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC9.25□□□□□ -0.93
APOBP04114 LINC00528-201ENST00000600723 2160 ntBASIC9.25□□□□□ -0.93
APOBP04114 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
APOBP04114 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
APOBP04114 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
APOBP04114 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms