Protein–RNA interactions for Protein: P02545

LMNA, Prelamin-A/C, humanhuman

Known RBP Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNAP02545 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
LMNAP02545 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
LMNAP02545 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LMNAP02545 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
LMNAP02545 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LMNAP02545 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC16.17■□□□□ 0.18
LMNAP02545 TDH-203ENST00000531764 1110 ntBASIC16.17■□□□□ 0.18
LMNAP02545 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC16.17■□□□□ 0.18
LMNAP02545 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC16.17■□□□□ 0.18
LMNAP02545 AC015967.2-201ENST00000624092 234 ntBASIC16.17■□□□□ 0.18
LMNAP02545 AC006435.4-201ENST00000625037 234 ntBASIC16.17■□□□□ 0.18
LMNAP02545 AL356737.1-201ENST00000634391 234 ntBASIC16.17■□□□□ 0.18
LMNAP02545 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LMNAP02545 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
LMNAP02545 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LMNAP02545 AC026748.1-201ENST00000624349 3251 ntBASIC16.17■□□□□ 0.18
LMNAP02545 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LMNAP02545 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
LMNAP02545 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LMNAP02545 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
LMNAP02545 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC16.17■□□□□ 0.18
LMNAP02545 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
LMNAP02545 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC16.17■□□□□ 0.18
LMNAP02545 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
LMNAP02545 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LMNAP02545 OR2I1P-209ENST00000641730 5365 ntBASIC16.17■□□□□ 0.18
LMNAP02545 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LMNAP02545 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LMNAP02545 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LMNAP02545 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LMNAP02545 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16.16■□□□□ 0.18
LMNAP02545 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LMNAP02545 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LMNAP02545 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LMNAP02545 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LMNAP02545 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC16.16■□□□□ 0.18
LMNAP02545 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LMNAP02545 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
LMNAP02545 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LMNAP02545 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
LMNAP02545 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LMNAP02545 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
LMNAP02545 SNX18-202ENST00000343017 3140 ntBASIC16.16■□□□□ 0.18
LMNAP02545 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LMNAP02545 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LMNAP02545 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
LMNAP02545 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
LMNAP02545 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LMNAP02545 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC16.16■□□□□ 0.18
LMNAP02545 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LMNAP02545 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
LMNAP02545 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC16.16■□□□□ 0.18
LMNAP02545 BCRP2-202ENST00000447763 634 ntBASIC16.16■□□□□ 0.18
LMNAP02545 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC16.16■□□□□ 0.18
LMNAP02545 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC16.16■□□□□ 0.18
LMNAP02545 BCRP6-201ENST00000510112 632 ntBASIC16.16■□□□□ 0.18
LMNAP02545 BCRP7-201ENST00000511549 544 ntBASIC16.16■□□□□ 0.18
LMNAP02545 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC16.16■□□□□ 0.18
LMNAP02545 AP001258.2-201ENST00000529891 490 ntBASIC16.16■□□□□ 0.18
LMNAP02545 MIR5189-201ENST00000577370 114 ntBASIC16.16■□□□□ 0.18
LMNAP02545 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC16.16■□□□□ 0.18
LMNAP02545 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC16.16■□□□□ 0.18
LMNAP02545 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC16.16■□□□□ 0.18
LMNAP02545 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC16.16■□□□□ 0.18
LMNAP02545 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
LMNAP02545 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LMNAP02545 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
LMNAP02545 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LMNAP02545 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC16.16■□□□□ 0.18
LMNAP02545 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC16.16■□□□□ 0.18
LMNAP02545 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LMNAP02545 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LMNAP02545 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC16.16■□□□□ 0.18
LMNAP02545 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC16.16■□□□□ 0.18
LMNAP02545 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LMNAP02545 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LMNAP02545 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LMNAP02545 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LMNAP02545 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LMNAP02545 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LMNAP02545 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LMNAP02545 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LMNAP02545 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
LMNAP02545 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
LMNAP02545 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LMNAP02545 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
LMNAP02545 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC16.15■□□□□ 0.18
LMNAP02545 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LMNAP02545 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
LMNAP02545 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
LMNAP02545 APOA1-205ENST00000375329 927 ntTSL 2 BASIC16.15■□□□□ 0.18
LMNAP02545 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC16.15■□□□□ 0.18
LMNAP02545 FXNP2-201ENST00000411625 547 ntBASIC16.15■□□□□ 0.18
LMNAP02545 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC16.15■□□□□ 0.18
LMNAP02545 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC16.15■□□□□ 0.18
LMNAP02545 RIT1-205ENST00000539040 919 ntTSL 2 BASIC16.15■□□□□ 0.18
LMNAP02545 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC16.15■□□□□ 0.18
LMNAP02545 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC16.15■□□□□ 0.18
LMNAP02545 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC16.15■□□□□ 0.18
LMNAP02545 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms