Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 BX284668.2-205ENST00000619677 828 ntBASIC16.33■□□□□ 0.2
TIMP1P01033 FRMPD2B-201ENST00000431305 1347 ntBASIC16.33■□□□□ 0.2
TIMP1P01033 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
TIMP1P01033 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC16.33■□□□□ 0.2
TIMP1P01033 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
TIMP1P01033 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC16.33■□□□□ 0.2
TIMP1P01033 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC16.33■□□□□ 0.2
TIMP1P01033 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
TIMP1P01033 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TIMP1P01033 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.33■□□□□ 0.2
TIMP1P01033 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TIMP1P01033 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TIMP1P01033 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TIMP1P01033 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TIMP1P01033 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TIMP1P01033 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TIMP1P01033 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TIMP1P01033 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TIMP1P01033 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
TIMP1P01033 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
TIMP1P01033 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TIMP1P01033 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TIMP1P01033 NCR3-202ENST00000376071 541 ntTSL 5 BASIC16.32■□□□□ 0.2
TIMP1P01033 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC16.32■□□□□ 0.2
TIMP1P01033 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TIMP1P01033 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC16.32■□□□□ 0.2
TIMP1P01033 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TIMP1P01033 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC16.32■□□□□ 0.2
TIMP1P01033 SKA2-202ENST00000437036 625 ntTSL 2 BASIC16.32■□□□□ 0.2
TIMP1P01033 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TIMP1P01033 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.32■□□□□ 0.2
TIMP1P01033 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TIMP1P01033 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
TIMP1P01033 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
TIMP1P01033 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC16.32■□□□□ 0.2
TIMP1P01033 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC16.32■□□□□ 0.2
TIMP1P01033 AC141586.1-203ENST00000567242 366 ntBASIC16.32■□□□□ 0.2
TIMP1P01033 RPL17P45-201ENST00000586289 509 ntBASIC16.32■□□□□ 0.2
TIMP1P01033 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC16.32■□□□□ 0.2
TIMP1P01033 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.32■□□□□ 0.2
TIMP1P01033 AL137783.1-201ENST00000623494 1896 ntBASIC16.32■□□□□ 0.2
TIMP1P01033 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
TIMP1P01033 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC16.32■□□□□ 0.2
TIMP1P01033 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TIMP1P01033 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TIMP1P01033 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
TIMP1P01033 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.31■□□□□ 0.2
TIMP1P01033 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.31■□□□□ 0.2
TIMP1P01033 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
TIMP1P01033 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TIMP1P01033 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TIMP1P01033 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TIMP1P01033 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TIMP1P01033 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TIMP1P01033 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TIMP1P01033 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TIMP1P01033 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TIMP1P01033 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TIMP1P01033 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC16.31■□□□□ 0.2
TIMP1P01033 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TIMP1P01033 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TIMP1P01033 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC16.31■□□□□ 0.2
TIMP1P01033 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TIMP1P01033 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TIMP1P01033 AC092364.2-201ENST00000596710 2692 ntBASIC16.31■□□□□ 0.2
TIMP1P01033 AL138725.1-201ENST00000407347 1314 ntBASIC16.31■□□□□ 0.2
TIMP1P01033 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TIMP1P01033 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
TIMP1P01033 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TIMP1P01033 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
TIMP1P01033 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC16.31■□□□□ 0.2
TIMP1P01033 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC16.31■□□□□ 0.2
TIMP1P01033 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC16.31■□□□□ 0.2
TIMP1P01033 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC16.31■□□□□ 0.2
TIMP1P01033 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC16.31■□□□□ 0.2
TIMP1P01033 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TIMP1P01033 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC16.31■□□□□ 0.2
TIMP1P01033 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC16.31■□□□□ 0.2
TIMP1P01033 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC16.31■□□□□ 0.2
TIMP1P01033 RPS15-202ENST00000585665 467 ntTSL 3 BASIC16.31■□□□□ 0.2
TIMP1P01033 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TIMP1P01033 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TIMP1P01033 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TIMP1P01033 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TIMP1P01033 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
TIMP1P01033 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TIMP1P01033 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TIMP1P01033 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
TIMP1P01033 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TIMP1P01033 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TIMP1P01033 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TIMP1P01033 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
TIMP1P01033 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TIMP1P01033 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
TIMP1P01033 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
TIMP1P01033 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
TIMP1P01033 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TIMP1P01033 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TIMP1P01033 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TIMP1P01033 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms