Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 PCDHA1-201ENST00000378133 2726 ntBASIC19.86■□□□□ 0.77
LTN1O94822 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
LTN1O94822 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
LTN1O94822 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC19.86■□□□□ 0.77
LTN1O94822 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
LTN1O94822 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC19.86■□□□□ 0.77
LTN1O94822 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LTN1O94822 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.86■□□□□ 0.77
LTN1O94822 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LTN1O94822 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
LTN1O94822 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
LTN1O94822 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC19.85■□□□□ 0.77
LTN1O94822 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LTN1O94822 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC19.85■□□□□ 0.77
LTN1O94822 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
LTN1O94822 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
LTN1O94822 AC104784.1-201ENST00000473096 294 ntBASIC19.85■□□□□ 0.77
LTN1O94822 SCARNA21-201ENST00000517026 139 ntBASIC19.85■□□□□ 0.77
LTN1O94822 AC026803.1-201ENST00000569130 274 ntBASIC19.85■□□□□ 0.77
LTN1O94822 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC19.85■□□□□ 0.77
LTN1O94822 AC008825.2-201ENST00000603374 718 ntBASIC19.85■□□□□ 0.77
LTN1O94822 AC092299.1-201ENST00000632679 757 ntBASIC19.85■□□□□ 0.77
LTN1O94822 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC19.85■□□□□ 0.77
LTN1O94822 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
LTN1O94822 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LTN1O94822 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC19.85■□□□□ 0.77
LTN1O94822 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
LTN1O94822 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC19.85■□□□□ 0.77
LTN1O94822 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
LTN1O94822 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC19.85■□□□□ 0.77
LTN1O94822 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LTN1O94822 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC19.85■□□□□ 0.77
LTN1O94822 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
LTN1O94822 SKA2-202ENST00000437036 625 ntTSL 2 BASIC19.85■□□□□ 0.77
LTN1O94822 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC19.85■□□□□ 0.77
LTN1O94822 CTBP2P4-201ENST00000513884 920 ntBASIC19.85■□□□□ 0.77
LTN1O94822 BX088702.1-201ENST00000610784 235 ntBASIC19.85■□□□□ 0.77
LTN1O94822 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC19.85■□□□□ 0.77
LTN1O94822 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
LTN1O94822 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LTN1O94822 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LTN1O94822 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
LTN1O94822 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.84■□□□□ 0.77
LTN1O94822 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC19.84■□□□□ 0.77
LTN1O94822 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LTN1O94822 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
LTN1O94822 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC19.84■□□□□ 0.77
LTN1O94822 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LTN1O94822 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC19.84■□□□□ 0.77
LTN1O94822 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
LTN1O94822 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LTN1O94822 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LTN1O94822 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LTN1O94822 TMBIM7P-203ENST00000641617 1718 ntBASIC19.84■□□□□ 0.77
LTN1O94822 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LTN1O94822 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LTN1O94822 NCR3-202ENST00000376071 541 ntTSL 5 BASIC19.84■□□□□ 0.77
LTN1O94822 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
LTN1O94822 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
LTN1O94822 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
LTN1O94822 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC19.84■□□□□ 0.77
LTN1O94822 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
LTN1O94822 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC19.84■□□□□ 0.77
LTN1O94822 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC19.84■□□□□ 0.77
LTN1O94822 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
LTN1O94822 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC19.84■□□□□ 0.77
LTN1O94822 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC19.84■□□□□ 0.77
LTN1O94822 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC19.84■□□□□ 0.77
LTN1O94822 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC19.84■□□□□ 0.77
LTN1O94822 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC19.84■□□□□ 0.77
LTN1O94822 MIR7845-201ENST00000618396 99 ntBASIC19.84■□□□□ 0.77
LTN1O94822 CMC2-224ENST00000630396 481 ntTSL 5 BASIC19.84■□□□□ 0.77
LTN1O94822 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
LTN1O94822 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC19.84■□□□□ 0.77
LTN1O94822 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
LTN1O94822 AC015909.3-201ENST00000572855 1794 ntBASIC19.84■□□□□ 0.77
LTN1O94822 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LTN1O94822 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LTN1O94822 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
LTN1O94822 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LTN1O94822 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC19.84■□□□□ 0.77
LTN1O94822 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
LTN1O94822 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
LTN1O94822 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
LTN1O94822 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
LTN1O94822 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
LTN1O94822 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
LTN1O94822 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
LTN1O94822 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC19.83■□□□□ 0.77
LTN1O94822 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC19.83■□□□□ 0.77
LTN1O94822 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
LTN1O94822 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC19.83■□□□□ 0.77
LTN1O94822 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC19.83■□□□□ 0.77
LTN1O94822 WDR7-208ENST00000589935 544 ntTSL 4 BASIC19.83■□□□□ 0.77
LTN1O94822 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC19.83■□□□□ 0.77
LTN1O94822 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.83■□□□□ 0.77
LTN1O94822 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
LTN1O94822 FRMPD2B-201ENST00000431305 1347 ntBASIC19.83■□□□□ 0.77
LTN1O94822 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
LTN1O94822 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms