Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
BEST1O76090 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
BEST1O76090 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
BEST1O76090 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.07■□□□□ 0.16
BEST1O76090 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC16.07■□□□□ 0.16
BEST1O76090 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
BEST1O76090 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
BEST1O76090 AL137783.1-201ENST00000623494 1896 ntBASIC16.07■□□□□ 0.16
BEST1O76090 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
BEST1O76090 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.07■□□□□ 0.16
BEST1O76090 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC16.07■□□□□ 0.16
BEST1O76090 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC16.07■□□□□ 0.16
BEST1O76090 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
BEST1O76090 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
BEST1O76090 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC16.07■□□□□ 0.16
BEST1O76090 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
BEST1O76090 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
BEST1O76090 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
BEST1O76090 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
BEST1O76090 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
BEST1O76090 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
BEST1O76090 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
BEST1O76090 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
BEST1O76090 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
BEST1O76090 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
BEST1O76090 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC16.06■□□□□ 0.16
BEST1O76090 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC16.06■□□□□ 0.16
BEST1O76090 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
BEST1O76090 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
BEST1O76090 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
BEST1O76090 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC16.06■□□□□ 0.16
BEST1O76090 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
BEST1O76090 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
BEST1O76090 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
BEST1O76090 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
BEST1O76090 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
BEST1O76090 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
BEST1O76090 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
BEST1O76090 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
BEST1O76090 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
BEST1O76090 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
BEST1O76090 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
BEST1O76090 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
BEST1O76090 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
BEST1O76090 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
BEST1O76090 B9D1-203ENST00000395615 805 ntTSL 3 BASIC16.06■□□□□ 0.16
BEST1O76090 RPL7P3-201ENST00000441388 714 ntBASIC16.06■□□□□ 0.16
BEST1O76090 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC16.06■□□□□ 0.16
BEST1O76090 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
BEST1O76090 AC104989.1-201ENST00000519711 778 ntBASIC16.06■□□□□ 0.16
BEST1O76090 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC16.06■□□□□ 0.16
BEST1O76090 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC16.06■□□□□ 0.16
BEST1O76090 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC16.06■□□□□ 0.16
BEST1O76090 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
BEST1O76090 KRT90P-201ENST00000549264 1064 ntBASIC16.06■□□□□ 0.16
BEST1O76090 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC16.06■□□□□ 0.16
BEST1O76090 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
BEST1O76090 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
BEST1O76090 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
BEST1O76090 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
BEST1O76090 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
BEST1O76090 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
BEST1O76090 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
BEST1O76090 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
BEST1O76090 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
BEST1O76090 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
BEST1O76090 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
BEST1O76090 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
BEST1O76090 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
BEST1O76090 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
BEST1O76090 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
BEST1O76090 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
BEST1O76090 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
BEST1O76090 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
BEST1O76090 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
BEST1O76090 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
BEST1O76090 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
BEST1O76090 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.05■□□□□ 0.16
BEST1O76090 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
BEST1O76090 FOS-202ENST00000535987 1402 ntTSL 2 BASIC16.05■□□□□ 0.16
BEST1O76090 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
BEST1O76090 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC16.05■□□□□ 0.16
BEST1O76090 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC16.05■□□□□ 0.16
BEST1O76090 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.05■□□□□ 0.16
BEST1O76090 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
BEST1O76090 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
BEST1O76090 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
BEST1O76090 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
BEST1O76090 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
BEST1O76090 BOLA2P3-201ENST00000404566 256 ntBASIC16.05■□□□□ 0.16
BEST1O76090 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC16.05■□□□□ 0.16
BEST1O76090 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
BEST1O76090 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
BEST1O76090 CNN2P8-201ENST00000421872 913 ntBASIC16.05■□□□□ 0.16
BEST1O76090 FAM197Y7-201ENST00000432892 766 ntBASIC16.05■□□□□ 0.16
BEST1O76090 KLF2P4-201ENST00000451959 1225 ntBASIC16.05■□□□□ 0.16
BEST1O76090 AL590640.2-201ENST00000457038 527 ntBASIC16.05■□□□□ 0.16
BEST1O76090 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC16.05■□□□□ 0.16
BEST1O76090 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
BEST1O76090 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 303.6 ms