Protein–RNA interactions for Protein: O75437

ZNF254, Zinc finger protein 254, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF254O75437 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ZNF254O75437 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
ZNF254O75437 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC13.73□□□□□ -0.21
ZNF254O75437 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ZNF254O75437 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC13.73□□□□□ -0.21
ZNF254O75437 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
ZNF254O75437 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC13.73□□□□□ -0.21
ZNF254O75437 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ZNF254O75437 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
ZNF254O75437 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
ZNF254O75437 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC13.72□□□□□ -0.21
ZNF254O75437 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ZNF254O75437 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
ZNF254O75437 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
ZNF254O75437 GRN-214ENST00000589265 1632 ntTSL 5 BASIC13.72□□□□□ -0.21
ZNF254O75437 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
ZNF254O75437 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ZNF254O75437 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
ZNF254O75437 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
ZNF254O75437 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ZNF254O75437 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ZNF254O75437 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ZNF254O75437 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC13.72□□□□□ -0.21
ZNF254O75437 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC13.72□□□□□ -0.21
ZNF254O75437 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ZNF254O75437 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ZNF254O75437 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
ZNF254O75437 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC13.72□□□□□ -0.21
ZNF254O75437 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ZNF254O75437 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC13.72□□□□□ -0.21
ZNF254O75437 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
ZNF254O75437 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ZNF254O75437 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
ZNF254O75437 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
ZNF254O75437 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC13.72□□□□□ -0.21
ZNF254O75437 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC13.72□□□□□ -0.21
ZNF254O75437 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
ZNF254O75437 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
ZNF254O75437 CD81-202ENST00000381036 880 ntTSL 3 BASIC13.72□□□□□ -0.21
ZNF254O75437 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
ZNF254O75437 AL627223.1-201ENST00000416693 442 ntBASIC13.72□□□□□ -0.21
ZNF254O75437 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC13.72□□□□□ -0.21
ZNF254O75437 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC13.72□□□□□ -0.21
ZNF254O75437 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
ZNF254O75437 POLD2P1-201ENST00000511220 997 ntBASIC13.72□□□□□ -0.21
ZNF254O75437 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC13.72□□□□□ -0.21
ZNF254O75437 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC13.72□□□□□ -0.21
ZNF254O75437 PRR29-209ENST00000582540 967 ntTSL 2 BASIC13.72□□□□□ -0.21
ZNF254O75437 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC13.72□□□□□ -0.21
ZNF254O75437 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
ZNF254O75437 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC13.72□□□□□ -0.21
ZNF254O75437 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC13.72□□□□□ -0.21
ZNF254O75437 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC13.72□□□□□ -0.21
ZNF254O75437 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC13.72□□□□□ -0.21
ZNF254O75437 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
ZNF254O75437 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
ZNF254O75437 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
ZNF254O75437 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ZNF254O75437 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ZNF254O75437 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
ZNF254O75437 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC13.72□□□□□ -0.21
ZNF254O75437 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
ZNF254O75437 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC13.72□□□□□ -0.21
ZNF254O75437 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.21
ZNF254O75437 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
ZNF254O75437 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
ZNF254O75437 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
ZNF254O75437 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
ZNF254O75437 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
ZNF254O75437 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
ZNF254O75437 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
ZNF254O75437 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC13.71□□□□□ -0.21
ZNF254O75437 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
ZNF254O75437 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
ZNF254O75437 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
ZNF254O75437 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
ZNF254O75437 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
ZNF254O75437 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
ZNF254O75437 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC13.71□□□□□ -0.21
ZNF254O75437 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
ZNF254O75437 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.21
ZNF254O75437 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
ZNF254O75437 IMPDH1P4-201ENST00000445028 1534 ntBASIC13.71□□□□□ -0.21
ZNF254O75437 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
ZNF254O75437 STOM-202ENST00000347359 870 ntTSL 2 BASIC13.71□□□□□ -0.21
ZNF254O75437 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
ZNF254O75437 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
ZNF254O75437 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
ZNF254O75437 FABP5-202ENST00000396359 986 ntTSL 5 BASIC13.71□□□□□ -0.21
ZNF254O75437 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
ZNF254O75437 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC13.71□□□□□ -0.21
ZNF254O75437 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC13.71□□□□□ -0.21
ZNF254O75437 TARDBPP1-201ENST00000442013 1203 ntBASIC13.71□□□□□ -0.21
ZNF254O75437 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
ZNF254O75437 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC13.71□□□□□ -0.21
ZNF254O75437 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC13.71□□□□□ -0.21
ZNF254O75437 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC13.71□□□□□ -0.21
ZNF254O75437 YBX1P5-201ENST00000509441 847 ntBASIC13.71□□□□□ -0.21
ZNF254O75437 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC13.71□□□□□ -0.21
ZNF254O75437 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC13.71□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms