Protein–RNA interactions for Protein: O60479

DLX3, Homeobox protein DLX-3, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DLX3O60479 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC15.09■□□□□ 0.01
DLX3O60479 AC015656.1-201ENST00000624209 3578 ntBASIC15.09■□□□□ 0.01
DLX3O60479 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC15.09■□□□□ 0.01
DLX3O60479 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
DLX3O60479 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
DLX3O60479 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
DLX3O60479 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
DLX3O60479 FES-203ENST00000394302 2133 ntTSL 5 BASIC15.09■□□□□ 0.01
DLX3O60479 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
DLX3O60479 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
DLX3O60479 AC211486.1-202ENST00000416371 468 ntBASIC15.09■□□□□ 0.01
DLX3O60479 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC15.09■□□□□ 0.01
DLX3O60479 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC15.09■□□□□ 0.01
DLX3O60479 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC15.09■□□□□ 0.01
DLX3O60479 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC15.09■□□□□ 0.01
DLX3O60479 HLA-V-204ENST00000476601 1289 ntBASIC15.09■□□□□ 0.01
DLX3O60479 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
DLX3O60479 AC211476.1-201ENST00000503899 468 ntBASIC15.09■□□□□ 0.01
DLX3O60479 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC15.09■□□□□ 0.01
DLX3O60479 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
DLX3O60479 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
DLX3O60479 AC010336.2-201ENST00000564226 506 ntBASIC15.09■□□□□ 0.01
DLX3O60479 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
DLX3O60479 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
DLX3O60479 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
DLX3O60479 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
DLX3O60479 TEX28P1-201ENST00000613479 1221 ntBASIC15.09■□□□□ 0.01
DLX3O60479 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC15.09■□□□□ 0.01
DLX3O60479 TEX28P2-201ENST00000617764 1221 ntBASIC15.09■□□□□ 0.01
DLX3O60479 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC15.09■□□□□ 0.01
DLX3O60479 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC15.09■□□□□ 0.01
DLX3O60479 AC007787.1-201ENST00000588095 1583 ntBASIC15.09■□□□□ 0.01
DLX3O60479 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
DLX3O60479 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC15.09■□□□□ 0.01
DLX3O60479 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
DLX3O60479 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
DLX3O60479 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
DLX3O60479 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
DLX3O60479 MYO15B-237ENST00000642007 4893 ntBASIC15.09■□□□□ 0.01
DLX3O60479 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
DLX3O60479 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
DLX3O60479 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC15.09■□□□□ 0.01
DLX3O60479 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
DLX3O60479 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC15.09■□□□□ 0.01
DLX3O60479 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
DLX3O60479 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
DLX3O60479 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
DLX3O60479 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
DLX3O60479 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
DLX3O60479 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC15.09■□□□□ 0.01
DLX3O60479 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
DLX3O60479 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
DLX3O60479 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC15.08■□□□□ 0.01
DLX3O60479 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
DLX3O60479 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
DLX3O60479 AC138969.3-201ENST00000546612 1459 ntBASIC15.08■□□□□ 0.01
DLX3O60479 AC138932.2-201ENST00000548268 1459 ntBASIC15.08■□□□□ 0.01
DLX3O60479 AC126755.4-201ENST00000549796 1459 ntBASIC15.08■□□□□ 0.01
DLX3O60479 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
DLX3O60479 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
DLX3O60479 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
DLX3O60479 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
DLX3O60479 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
DLX3O60479 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC15.08■□□□□ 0
DLX3O60479 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
DLX3O60479 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
DLX3O60479 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC15.08■□□□□ 0
DLX3O60479 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
DLX3O60479 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC15.08■□□□□ 0
DLX3O60479 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC15.08■□□□□ 0
DLX3O60479 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
DLX3O60479 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
DLX3O60479 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
DLX3O60479 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
DLX3O60479 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
DLX3O60479 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
DLX3O60479 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC15.08■□□□□ 0
DLX3O60479 BX842568.4-201ENST00000421222 227 ntBASIC15.08■□□□□ 0
DLX3O60479 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC15.08■□□□□ 0
DLX3O60479 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC15.08■□□□□ 0
DLX3O60479 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
DLX3O60479 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC15.08■□□□□ 0
DLX3O60479 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
DLX3O60479 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
DLX3O60479 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC15.08■□□□□ 0
DLX3O60479 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC15.08■□□□□ 0
DLX3O60479 AC051619.7-201ENST00000568314 623 ntBASIC15.08■□□□□ 0
DLX3O60479 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC15.08■□□□□ 0
DLX3O60479 AC074044.1-201ENST00000609673 707 ntBASIC15.08■□□□□ 0
DLX3O60479 AL138828.2-201ENST00000615812 383 ntBASIC15.08■□□□□ 0
DLX3O60479 SPDYE12P-201ENST00000618416 771 ntBASIC15.08■□□□□ 0
DLX3O60479 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC15.08■□□□□ 0
DLX3O60479 AL109936.8-201ENST00000641772 604 ntBASIC15.08■□□□□ 0
DLX3O60479 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
DLX3O60479 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
DLX3O60479 AP001267.2-201ENST00000532619 2086 ntBASIC15.08■□□□□ 0
DLX3O60479 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC15.08■□□□□ 0
DLX3O60479 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC15.08■□□□□ 0
DLX3O60479 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
DLX3O60479 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms