Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC14.7□□□□□ -0.06
LCMT2O60294 REXO1L2P-201ENST00000425429 2069 ntBASIC14.7□□□□□ -0.06
LCMT2O60294 AGAP7P-201ENST00000582299 2062 ntBASIC14.7□□□□□ -0.06
LCMT2O60294 AGAP14-201ENST00000624701 2060 ntBASIC14.7□□□□□ -0.06
LCMT2O60294 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
LCMT2O60294 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
LCMT2O60294 USE1-206ENST00000595101 1776 ntTSL 2 BASIC14.7□□□□□ -0.06
LCMT2O60294 AGER-206ENST00000375070 1463 ntTSL 5 BASIC14.7□□□□□ -0.06
LCMT2O60294 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
LCMT2O60294 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
LCMT2O60294 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
LCMT2O60294 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LCMT2O60294 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
LCMT2O60294 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
LCMT2O60294 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LCMT2O60294 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
LCMT2O60294 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC14.7□□□□□ -0.06
LCMT2O60294 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
LCMT2O60294 GSN-215ENST00000545652 2428 ntTSL 2 BASIC14.7□□□□□ -0.06
LCMT2O60294 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
LCMT2O60294 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LCMT2O60294 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC14.7□□□□□ -0.06
LCMT2O60294 RN7SL692P-201ENST00000464677 288 ntBASIC14.7□□□□□ -0.06
LCMT2O60294 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LCMT2O60294 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC14.7□□□□□ -0.06
LCMT2O60294 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC14.7□□□□□ -0.06
LCMT2O60294 AP001582.1-201ENST00000525856 295 ntBASIC14.7□□□□□ -0.06
LCMT2O60294 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC14.7□□□□□ -0.06
LCMT2O60294 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC14.7□□□□□ -0.06
LCMT2O60294 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
LCMT2O60294 IFT20-206ENST00000578122 834 ntTSL 2 BASIC14.7□□□□□ -0.06
LCMT2O60294 IFT20-208ENST00000578985 831 ntTSL 3 BASIC14.7□□□□□ -0.06
LCMT2O60294 CLUHP6-201ENST00000580789 941 ntBASIC14.7□□□□□ -0.06
LCMT2O60294 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC14.7□□□□□ -0.06
LCMT2O60294 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC14.7□□□□□ -0.06
LCMT2O60294 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
LCMT2O60294 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC14.7□□□□□ -0.06
LCMT2O60294 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.7□□□□□ -0.06
LCMT2O60294 AC005252.2-201ENST00000624630 1141 ntBASIC14.7□□□□□ -0.06
LCMT2O60294 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
LCMT2O60294 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
LCMT2O60294 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LCMT2O60294 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LCMT2O60294 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
LCMT2O60294 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LCMT2O60294 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC14.7□□□□□ -0.06
LCMT2O60294 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
LCMT2O60294 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LCMT2O60294 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
LCMT2O60294 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
LCMT2O60294 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LCMT2O60294 AL158070.2-201ENST00000623713 1621 ntBASIC14.7□□□□□ -0.06
LCMT2O60294 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
LCMT2O60294 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
LCMT2O60294 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LCMT2O60294 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC14.69□□□□□ -0.06
LCMT2O60294 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC14.69□□□□□ -0.06
LCMT2O60294 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LCMT2O60294 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC14.69□□□□□ -0.06
LCMT2O60294 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC14.69□□□□□ -0.06
LCMT2O60294 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC14.69□□□□□ -0.06
LCMT2O60294 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
LCMT2O60294 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
LCMT2O60294 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
LCMT2O60294 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
LCMT2O60294 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LCMT2O60294 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
LCMT2O60294 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
LCMT2O60294 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
LCMT2O60294 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LCMT2O60294 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LCMT2O60294 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LCMT2O60294 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LCMT2O60294 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LCMT2O60294 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LCMT2O60294 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
LCMT2O60294 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LCMT2O60294 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC14.69□□□□□ -0.06
LCMT2O60294 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
LCMT2O60294 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LCMT2O60294 MPV17-208ENST00000405076 603 ntTSL 5 BASIC14.69□□□□□ -0.06
LCMT2O60294 AP006294.1-201ENST00000415407 339 ntBASIC14.69□□□□□ -0.06
LCMT2O60294 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
LCMT2O60294 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC14.69□□□□□ -0.06
LCMT2O60294 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC14.69□□□□□ -0.06
LCMT2O60294 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
LCMT2O60294 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC14.69□□□□□ -0.06
LCMT2O60294 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LCMT2O60294 ENPP7P5-201ENST00000541031 1031 ntBASIC14.69□□□□□ -0.06
LCMT2O60294 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC14.69□□□□□ -0.06
LCMT2O60294 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC14.69□□□□□ -0.06
LCMT2O60294 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
LCMT2O60294 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC14.69□□□□□ -0.06
LCMT2O60294 RPSAP52-203ENST00000622976 1023 ntBASIC14.69□□□□□ -0.06
LCMT2O60294 CU634019.7-201ENST00000624153 1185 ntBASIC14.69□□□□□ -0.06
LCMT2O60294 FP236241.2-201ENST00000624906 1185 ntBASIC14.69□□□□□ -0.06
LCMT2O60294 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC14.69□□□□□ -0.06
LCMT2O60294 ABBA01031660.1-201ENST00000635219 756 ntBASIC14.69□□□□□ -0.06
LCMT2O60294 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC14.69□□□□□ -0.06
LCMT2O60294 AC105233.6-201ENST00000642093 218 ntBASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms