Protein–RNA interactions for Protein: O43638

FOXS1, Forkhead box protein S1, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXS1O43638 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
FOXS1O43638 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
FOXS1O43638 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
FOXS1O43638 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
FOXS1O43638 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
FOXS1O43638 GUK1-206ENST00000366723 845 ntTSL 5 BASIC14.4□□□□□ -0.1
FOXS1O43638 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
FOXS1O43638 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
FOXS1O43638 GZMB-202ENST00000382540 816 ntTSL 5 BASIC14.4□□□□□ -0.1
FOXS1O43638 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
FOXS1O43638 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC14.4□□□□□ -0.1
FOXS1O43638 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC14.4□□□□□ -0.1
FOXS1O43638 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC14.4□□□□□ -0.1
FOXS1O43638 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC14.4□□□□□ -0.1
FOXS1O43638 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC14.4□□□□□ -0.1
FOXS1O43638 RPL8-205ENST00000527914 551 ntTSL 3 BASIC14.4□□□□□ -0.1
FOXS1O43638 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC14.4□□□□□ -0.1
FOXS1O43638 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC14.4□□□□□ -0.1
FOXS1O43638 AL359881.2-201ENST00000602973 570 ntBASIC14.4□□□□□ -0.1
FOXS1O43638 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC14.4□□□□□ -0.1
FOXS1O43638 ETV2-208ENST00000621247 941 ntTSL 5 BASIC14.4□□□□□ -0.1
FOXS1O43638 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC14.4□□□□□ -0.1
FOXS1O43638 COX11-210ENST00000639671 696 ntBASIC14.4□□□□□ -0.1
FOXS1O43638 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
FOXS1O43638 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
FOXS1O43638 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
FOXS1O43638 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
FOXS1O43638 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
FOXS1O43638 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
FOXS1O43638 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
FOXS1O43638 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
FOXS1O43638 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
FOXS1O43638 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
FOXS1O43638 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC14.4□□□□□ -0.1
FOXS1O43638 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
FOXS1O43638 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
FOXS1O43638 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
FOXS1O43638 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
FOXS1O43638 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC14.4□□□□□ -0.1
FOXS1O43638 CASK-202ENST00000378158 3848 ntTSL 5 BASIC14.4□□□□□ -0.1
FOXS1O43638 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC14.4□□□□□ -0.1
FOXS1O43638 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
FOXS1O43638 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
FOXS1O43638 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
FOXS1O43638 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
FOXS1O43638 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
FOXS1O43638 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC14.39□□□□□ -0.11
FOXS1O43638 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC14.39□□□□□ -0.11
FOXS1O43638 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
FOXS1O43638 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
FOXS1O43638 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
FOXS1O43638 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
FOXS1O43638 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC14.39□□□□□ -0.11
FOXS1O43638 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
FOXS1O43638 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC14.39□□□□□ -0.11
FOXS1O43638 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
FOXS1O43638 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
FOXS1O43638 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC14.39□□□□□ -0.11
FOXS1O43638 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
FOXS1O43638 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
FOXS1O43638 WASH3P-207ENST00000560956 1394 ntBASIC14.39□□□□□ -0.11
FOXS1O43638 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC14.39□□□□□ -0.11
FOXS1O43638 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC14.39□□□□□ -0.11
FOXS1O43638 REXO1L2P-201ENST00000425429 2069 ntBASIC14.39□□□□□ -0.11
FOXS1O43638 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
FOXS1O43638 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
FOXS1O43638 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
FOXS1O43638 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
FOXS1O43638 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
FOXS1O43638 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
FOXS1O43638 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC14.39□□□□□ -0.11
FOXS1O43638 FAM197Y7-201ENST00000432892 766 ntBASIC14.39□□□□□ -0.11
FOXS1O43638 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC14.39□□□□□ -0.11
FOXS1O43638 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
FOXS1O43638 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC14.39□□□□□ -0.11
FOXS1O43638 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC14.39□□□□□ -0.11
FOXS1O43638 AP005482.1-201ENST00000563722 1273 ntBASIC14.39□□□□□ -0.11
FOXS1O43638 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC14.39□□□□□ -0.11
FOXS1O43638 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
FOXS1O43638 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
FOXS1O43638 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
FOXS1O43638 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
FOXS1O43638 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
FOXS1O43638 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
FOXS1O43638 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC14.39□□□□□ -0.11
FOXS1O43638 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
FOXS1O43638 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
FOXS1O43638 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
FOXS1O43638 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC14.39□□□□□ -0.11
FOXS1O43638 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
FOXS1O43638 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
FOXS1O43638 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
FOXS1O43638 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC14.39□□□□□ -0.11
FOXS1O43638 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
FOXS1O43638 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC14.39□□□□□ -0.11
FOXS1O43638 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
FOXS1O43638 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
FOXS1O43638 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
FOXS1O43638 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
FOXS1O43638 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms