Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
HOXA2O43364 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
HOXA2O43364 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.31■□□□□ 0.2
HOXA2O43364 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HOXA2O43364 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HOXA2O43364 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HOXA2O43364 REXO1L5P-201ENST00000622260 2098 ntBASIC16.31■□□□□ 0.2
HOXA2O43364 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC16.31■□□□□ 0.2
HOXA2O43364 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
HOXA2O43364 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HOXA2O43364 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
HOXA2O43364 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC16.31■□□□□ 0.2
HOXA2O43364 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HOXA2O43364 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HOXA2O43364 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
HOXA2O43364 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC16.31■□□□□ 0.2
HOXA2O43364 KRTAP19-9P-201ENST00000421795 191 ntBASIC16.31■□□□□ 0.2
HOXA2O43364 NKAIN1P1-201ENST00000435754 582 ntBASIC16.31■□□□□ 0.2
HOXA2O43364 TUBB8P8-201ENST00000458717 1058 ntBASIC16.31■□□□□ 0.2
HOXA2O43364 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HOXA2O43364 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC16.31■□□□□ 0.2
HOXA2O43364 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC16.31■□□□□ 0.2
HOXA2O43364 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
HOXA2O43364 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC16.31■□□□□ 0.2
HOXA2O43364 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HOXA2O43364 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HOXA2O43364 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
HOXA2O43364 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HOXA2O43364 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC16.31■□□□□ 0.2
HOXA2O43364 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HOXA2O43364 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
HOXA2O43364 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HOXA2O43364 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
HOXA2O43364 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
HOXA2O43364 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.31■□□□□ 0.2
HOXA2O43364 PCDH8P1-201ENST00000428983 2773 ntBASIC16.31■□□□□ 0.2
HOXA2O43364 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HOXA2O43364 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.31■□□□□ 0.2
HOXA2O43364 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HOXA2O43364 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HOXA2O43364 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HOXA2O43364 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HOXA2O43364 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HOXA2O43364 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HOXA2O43364 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
HOXA2O43364 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HOXA2O43364 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.3■□□□□ 0.2
HOXA2O43364 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HOXA2O43364 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.3■□□□□ 0.2
HOXA2O43364 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
HOXA2O43364 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
HOXA2O43364 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HOXA2O43364 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC16.3■□□□□ 0.2
HOXA2O43364 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.3■□□□□ 0.2
HOXA2O43364 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
HOXA2O43364 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC16.3■□□□□ 0.2
HOXA2O43364 UPF3AP2-201ENST00000457924 1132 ntBASIC16.3■□□□□ 0.2
HOXA2O43364 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HOXA2O43364 AC026434.2-201ENST00000506094 1078 ntBASIC16.3■□□□□ 0.2
HOXA2O43364 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC16.3■□□□□ 0.2
HOXA2O43364 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
HOXA2O43364 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC16.3■□□□□ 0.2
HOXA2O43364 AC005730.2-201ENST00000564549 1184 ntBASIC16.3■□□□□ 0.2
HOXA2O43364 RN7SL121P-201ENST00000584223 273 ntBASIC16.3■□□□□ 0.2
HOXA2O43364 AL355338.1-201ENST00000612598 913 ntTSL 2 BASIC16.3■□□□□ 0.2
HOXA2O43364 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC16.3■□□□□ 0.2
HOXA2O43364 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC16.3■□□□□ 0.2
HOXA2O43364 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HOXA2O43364 AC100757.4-201ENST00000626934 759 ntBASIC16.3■□□□□ 0.2
HOXA2O43364 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HOXA2O43364 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HOXA2O43364 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HOXA2O43364 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
HOXA2O43364 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
HOXA2O43364 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
HOXA2O43364 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC16.3■□□□□ 0.2
HOXA2O43364 AC010491.1-201ENST00000563101 2797 ntBASIC16.3■□□□□ 0.2
HOXA2O43364 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.3■□□□□ 0.2
HOXA2O43364 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HOXA2O43364 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.3■□□□□ 0.2
HOXA2O43364 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
HOXA2O43364 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC16.29■□□□□ 0.2
HOXA2O43364 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HOXA2O43364 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HOXA2O43364 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC16.29■□□□□ 0.2
HOXA2O43364 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC16.29■□□□□ 0.2
HOXA2O43364 RAB5A-203ENST00000422242 1443 ntTSL 2 BASIC16.29■□□□□ 0.2
HOXA2O43364 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HOXA2O43364 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC16.29■□□□□ 0.2
HOXA2O43364 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
HOXA2O43364 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
HOXA2O43364 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HOXA2O43364 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HOXA2O43364 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.29■□□□□ 0.2
HOXA2O43364 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
HOXA2O43364 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
HOXA2O43364 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
HOXA2O43364 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
HOXA2O43364 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HOXA2O43364 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms