Protein–RNA interactions for Protein: O15439

ABCC4, Multidrug resistance-associated protein 4, humanhuman

Predictions only

Length 1,325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC4O15439 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ABCC4O15439 RPL8-205ENST00000527914 551 ntTSL 3 BASIC19.43■□□□□ 0.7
ABCC4O15439 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
ABCC4O15439 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ABCC4O15439 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
ABCC4O15439 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
ABCC4O15439 IFT20-206ENST00000578122 834 ntTSL 2 BASIC19.43■□□□□ 0.7
ABCC4O15439 IFT20-208ENST00000578985 831 ntTSL 3 BASIC19.43■□□□□ 0.7
ABCC4O15439 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC19.43■□□□□ 0.7
ABCC4O15439 INO80C-210ENST00000590757 595 ntTSL 2 BASIC19.43■□□□□ 0.7
ABCC4O15439 AC084346.2-201ENST00000607097 949 ntBASIC19.43■□□□□ 0.7
ABCC4O15439 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC19.43■□□□□ 0.7
ABCC4O15439 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
ABCC4O15439 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ABCC4O15439 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ABCC4O15439 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ABCC4O15439 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ABCC4O15439 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ABCC4O15439 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ABCC4O15439 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC19.42■□□□□ 0.7
ABCC4O15439 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
ABCC4O15439 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
ABCC4O15439 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
ABCC4O15439 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC19.42■□□□□ 0.7
ABCC4O15439 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ABCC4O15439 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
ABCC4O15439 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ABCC4O15439 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
ABCC4O15439 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ABCC4O15439 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
ABCC4O15439 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ABCC4O15439 RNU1-114P-201ENST00000365297 166 ntBASIC19.42■□□□□ 0.7
ABCC4O15439 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC19.42■□□□□ 0.7
ABCC4O15439 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
ABCC4O15439 AL645937.2-201ENST00000396808 931 ntBASIC19.42■□□□□ 0.7
ABCC4O15439 BCYRN1-201ENST00000418539 200 ntBASIC19.42■□□□□ 0.7
ABCC4O15439 ZNF767P-206ENST00000513792 565 ntBASIC19.42■□□□□ 0.7
ABCC4O15439 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
ABCC4O15439 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC19.42■□□□□ 0.7
ABCC4O15439 AC079316.1-201ENST00000548397 411 ntBASIC19.42■□□□□ 0.7
ABCC4O15439 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC19.42■□□□□ 0.7
ABCC4O15439 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ABCC4O15439 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC19.42■□□□□ 0.7
ABCC4O15439 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC19.42■□□□□ 0.7
ABCC4O15439 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ABCC4O15439 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC19.42■□□□□ 0.7
ABCC4O15439 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
ABCC4O15439 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
ABCC4O15439 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ABCC4O15439 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC19.42■□□□□ 0.7
ABCC4O15439 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
ABCC4O15439 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ABCC4O15439 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
ABCC4O15439 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
ABCC4O15439 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC19.41■□□□□ 0.7
ABCC4O15439 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ABCC4O15439 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
ABCC4O15439 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ABCC4O15439 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ABCC4O15439 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ABCC4O15439 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ABCC4O15439 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
ABCC4O15439 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ABCC4O15439 DBET-201ENST00000630918 3363 ntBASIC19.41■□□□□ 0.7
ABCC4O15439 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
ABCC4O15439 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
ABCC4O15439 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
ABCC4O15439 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ABCC4O15439 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ABCC4O15439 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ABCC4O15439 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ABCC4O15439 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ABCC4O15439 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC19.41■□□□□ 0.7
ABCC4O15439 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC19.41■□□□□ 0.7
ABCC4O15439 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC19.41■□□□□ 0.7
ABCC4O15439 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC19.41■□□□□ 0.7
ABCC4O15439 AC008687.7-202ENST00000637404 953 ntBASIC19.41■□□□□ 0.7
ABCC4O15439 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ABCC4O15439 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC19.41■□□□□ 0.7
ABCC4O15439 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
ABCC4O15439 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC19.41■□□□□ 0.7
ABCC4O15439 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ABCC4O15439 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ABCC4O15439 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC19.41■□□□□ 0.7
ABCC4O15439 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC19.41■□□□□ 0.7
ABCC4O15439 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ABCC4O15439 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
ABCC4O15439 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ABCC4O15439 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
ABCC4O15439 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ABCC4O15439 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
ABCC4O15439 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ABCC4O15439 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ABCC4O15439 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ABCC4O15439 MARS-233ENST00000628866 2583 ntTSL 5 BASIC19.4■□□□□ 0.7
ABCC4O15439 AC103702.1-201ENST00000548801 2630 ntBASIC19.4■□□□□ 0.7
ABCC4O15439 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC19.4■□□□□ 0.7
ABCC4O15439 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ABCC4O15439 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC19.4■□□□□ 0.7
ABCC4O15439 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms