Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC23.94■■□□□ 1.42
CHD1O14646 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC23.94■■□□□ 1.42
CHD1O14646 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CHD1O14646 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC23.93■■□□□ 1.42
CHD1O14646 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CHD1O14646 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC23.93■■□□□ 1.42
CHD1O14646 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC23.93■■□□□ 1.42
CHD1O14646 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
CHD1O14646 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
CHD1O14646 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC23.93■■□□□ 1.42
CHD1O14646 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC23.93■■□□□ 1.42
CHD1O14646 PIFO-201ENST00000369737 746 ntTSL 2 BASIC23.93■■□□□ 1.42
CHD1O14646 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC23.93■■□□□ 1.42
CHD1O14646 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
CHD1O14646 TAGLN3-203ENST00000455401 1164 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CHD1O14646 RPS23-207ENST00000511844 530 ntTSL 2 BASIC23.93■■□□□ 1.42
CHD1O14646 CTBP2P6-201ENST00000526402 1229 ntBASIC23.93■■□□□ 1.42
CHD1O14646 ANO3-205ENST00000531646 1264 ntTSL 4 BASIC23.93■■□□□ 1.42
CHD1O14646 APOC4-202ENST00000592954 615 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CHD1O14646 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CHD1O14646 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC23.93■■□□□ 1.42
CHD1O14646 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC23.93■■□□□ 1.42
CHD1O14646 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC23.93■■□□□ 1.42
CHD1O14646 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC23.93■■□□□ 1.42
CHD1O14646 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CHD1O14646 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC23.93■■□□□ 1.42
CHD1O14646 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC23.93■■□□□ 1.42
CHD1O14646 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC23.93■■□□□ 1.42
CHD1O14646 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC23.93■■□□□ 1.42
CHD1O14646 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CHD1O14646 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CHD1O14646 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC23.93■■□□□ 1.42
CHD1O14646 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
CHD1O14646 HHLA3-202ENST00000361764 692 ntAPPRIS P3 TSL 2 BASIC23.93■■□□□ 1.42
CHD1O14646 TRBV5-7-201ENST00000390378 343 ntAPPRIS P1 BASIC23.93■■□□□ 1.42
CHD1O14646 RPL18AP8-201ENST00000486071 528 ntBASIC23.93■■□□□ 1.42
CHD1O14646 AL928742.1-201ENST00000497397 548 ntTSL 4 BASIC23.93■■□□□ 1.42
CHD1O14646 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC23.93■■□□□ 1.42
CHD1O14646 C11orf1-202ENST00000528125 534 ntTSL 2 BASIC23.93■■□□□ 1.42
CHD1O14646 F11R-204ENST00000537746 1245 ntTSL 2 BASIC23.93■■□□□ 1.42
CHD1O14646 RARS-210ENST00000626454 177 ntTSL 5 BASIC23.93■■□□□ 1.42
CHD1O14646 AC110057.1-201ENST00000636031 898 ntBASIC23.93■■□□□ 1.42
CHD1O14646 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC23.93■■□□□ 1.42
CHD1O14646 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC23.92■■□□□ 1.42
CHD1O14646 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CHD1O14646 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
CHD1O14646 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
CHD1O14646 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CHD1O14646 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC23.92■■□□□ 1.42
CHD1O14646 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC23.92■■□□□ 1.42
CHD1O14646 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
CHD1O14646 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
CHD1O14646 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CHD1O14646 IGHV5-51-201ENST00000390626 410 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
CHD1O14646 ID2-AS1-201ENST00000412712 953 ntTSL 5 BASIC23.92■■□□□ 1.42
CHD1O14646 SCARNA12-201ENST00000459155 270 ntBASIC23.92■■□□□ 1.42
CHD1O14646 GLUD1P3-201ENST00000507952 896 ntTSL 2 BASIC23.92■■□□□ 1.42
CHD1O14646 FXYD6-208ENST00000529335 708 ntTSL 3 BASIC23.92■■□□□ 1.42
CHD1O14646 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CHD1O14646 AC142086.5-202ENST00000562500 217 ntBASIC23.92■■□□□ 1.42
CHD1O14646 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
CHD1O14646 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC23.92■■□□□ 1.42
CHD1O14646 PPHLN1-223ENST00000610488 1521 ntTSL 5 BASIC23.92■■□□□ 1.42
CHD1O14646 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC23.91■■□□□ 1.42
CHD1O14646 MC5R-201ENST00000324750 1319 ntAPPRIS P1 BASIC23.91■■□□□ 1.42
CHD1O14646 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC23.91■■□□□ 1.42
CHD1O14646 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CHD1O14646 JTB-202ENST00000356648 1040 ntTSL 2 BASIC23.91■■□□□ 1.42
CHD1O14646 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC23.91■■□□□ 1.42
CHD1O14646 LINC01983-201ENST00000413586 574 ntTSL 2 BASIC23.91■■□□□ 1.42
CHD1O14646 AC103702.2-203ENST00000425510 379 ntTSL 5 BASIC23.91■■□□□ 1.42
CHD1O14646 FOXP4-AS1-202ENST00000432751 409 ntTSL 2 BASIC23.91■■□□□ 1.42
CHD1O14646 HIST1H2APS2-201ENST00000454426 370 ntBASIC23.91■■□□□ 1.42
CHD1O14646 BPIFB5P-201ENST00000457066 1099 ntBASIC23.91■■□□□ 1.42
CHD1O14646 RPS18P9-201ENST00000482817 460 ntBASIC23.91■■□□□ 1.42
CHD1O14646 RNA5SP406-201ENST00000516106 112 ntBASIC23.91■■□□□ 1.42
CHD1O14646 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC23.91■■□□□ 1.42
CHD1O14646 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC23.91■■□□□ 1.42
CHD1O14646 AC068831.5-201ENST00000557387 328 ntBASIC23.91■■□□□ 1.42
CHD1O14646 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC23.91■■□□□ 1.42
CHD1O14646 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC23.91■■□□□ 1.42
CHD1O14646 AC129778.1-201ENST00000623957 920 ntTSL 5 BASIC23.91■■□□□ 1.42
CHD1O14646 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
CHD1O14646 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC23.91■■□□□ 1.42
CHD1O14646 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
CHD1O14646 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CHD1O14646 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
CHD1O14646 FTX-216ENST00000638985 1367 ntTSL 5 BASIC23.91■■□□□ 1.42
CHD1O14646 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC23.91■■□□□ 1.42
CHD1O14646 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC23.9■■□□□ 1.42
CHD1O14646 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC23.9■■□□□ 1.42
CHD1O14646 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CHD1O14646 AL121983.2-202ENST00000419983 535 ntTSL 3 BASIC23.9■■□□□ 1.42
CHD1O14646 RN7SL564P-201ENST00000496309 250 ntBASIC23.9■■□□□ 1.42
CHD1O14646 AF111169.3-201ENST00000553991 756 ntTSL 5 BASIC23.9■■□□□ 1.42
CHD1O14646 IFI27L1-212ENST00000557218 413 ntTSL 3 BASIC23.9■■□□□ 1.42
CHD1O14646 OSMR-AS1-204ENST00000636516 850 ntTSL 5 BASIC23.9■■□□□ 1.42
CHD1O14646 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
CHD1O14646 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CHD1O14646 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms