Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
SOX1O00570 CR392039.1-201ENST00000623217 204 ntBASIC16.07■□□□□ 0.16
SOX1O00570 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SOX1O00570 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC16.07■□□□□ 0.16
SOX1O00570 RAN-210ENST00000541630 1475 ntTSL 2 BASIC16.07■□□□□ 0.16
SOX1O00570 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SOX1O00570 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC16.07■□□□□ 0.16
SOX1O00570 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SOX1O00570 INE2-201ENST00000630399 1874 ntBASIC16.07■□□□□ 0.16
SOX1O00570 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SOX1O00570 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
SOX1O00570 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC16.07■□□□□ 0.16
SOX1O00570 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SOX1O00570 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SOX1O00570 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC16.07■□□□□ 0.16
SOX1O00570 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SOX1O00570 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SOX1O00570 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SOX1O00570 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SOX1O00570 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SOX1O00570 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SOX1O00570 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
SOX1O00570 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.06■□□□□ 0.16
SOX1O00570 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SOX1O00570 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
SOX1O00570 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
SOX1O00570 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
SOX1O00570 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC16.06■□□□□ 0.16
SOX1O00570 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SOX1O00570 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SOX1O00570 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SOX1O00570 NME4-203ENST00000397722 1232 ntTSL 2 BASIC16.06■□□□□ 0.16
SOX1O00570 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC16.06■□□□□ 0.16
SOX1O00570 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
SOX1O00570 BANF1P3-201ENST00000412556 261 ntBASIC16.06■□□□□ 0.16
SOX1O00570 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC16.06■□□□□ 0.16
SOX1O00570 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SOX1O00570 AC083801.1-201ENST00000491689 358 ntBASIC16.06■□□□□ 0.16
SOX1O00570 C11orf1-202ENST00000528125 534 ntTSL 2 BASIC16.06■□□□□ 0.16
SOX1O00570 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC16.06■□□□□ 0.16
SOX1O00570 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC16.06■□□□□ 0.16
SOX1O00570 AC130456.3-201ENST00000561762 633 ntTSL 3 BASIC16.06■□□□□ 0.16
SOX1O00570 AP005899.1-201ENST00000579467 544 ntTSL 3 BASIC16.06■□□□□ 0.16
SOX1O00570 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC16.06■□□□□ 0.16
SOX1O00570 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SOX1O00570 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
SOX1O00570 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SOX1O00570 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SOX1O00570 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
SOX1O00570 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.06■□□□□ 0.16
SOX1O00570 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.06■□□□□ 0.16
SOX1O00570 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
SOX1O00570 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SOX1O00570 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
SOX1O00570 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SOX1O00570 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
SOX1O00570 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
SOX1O00570 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SOX1O00570 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SOX1O00570 AL672207.1-201ENST00000328462 1570 ntBASIC16.05■□□□□ 0.16
SOX1O00570 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SOX1O00570 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
SOX1O00570 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SOX1O00570 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SOX1O00570 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.05■□□□□ 0.16
SOX1O00570 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SOX1O00570 C18orf21-202ENST00000333234 958 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SOX1O00570 RBM38-204ENST00000371219 760 ntTSL 2 BASIC16.05■□□□□ 0.16
SOX1O00570 JPT2-203ENST00000382711 894 ntTSL 4 BASIC16.05■□□□□ 0.16
SOX1O00570 CST1-202ENST00000398402 655 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
SOX1O00570 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SOX1O00570 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC16.05■□□□□ 0.16
SOX1O00570 AC012506.1-201ENST00000423706 525 ntTSL 4 BASIC16.05■□□□□ 0.16
SOX1O00570 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SOX1O00570 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC16.05■□□□□ 0.16
SOX1O00570 RNLS-203ENST00000437752 525 ntTSL 2 BASIC16.05■□□□□ 0.16
SOX1O00570 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SOX1O00570 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC16.05■□□□□ 0.16
SOX1O00570 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SOX1O00570 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC16.05■□□□□ 0.16
SOX1O00570 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC16.05■□□□□ 0.16
SOX1O00570 ZSCAN2-210ENST00000538076 1109 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SOX1O00570 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC16.05■□□□□ 0.16
SOX1O00570 DUT-207ENST00000559416 635 ntTSL 2 BASIC16.05■□□□□ 0.16
SOX1O00570 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
SOX1O00570 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC16.05■□□□□ 0.16
SOX1O00570 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC16.05■□□□□ 0.16
SOX1O00570 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SOX1O00570 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.05■□□□□ 0.16
SOX1O00570 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SOX1O00570 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.05■□□□□ 0.16
SOX1O00570 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SOX1O00570 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16.05■□□□□ 0.16
SOX1O00570 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SOX1O00570 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SOX1O00570 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SOX1O00570 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SOX1O00570 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SOX1O00570 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
SOX1O00570 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms