Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.09
AP3B1O00203 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
AP3B1O00203 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
AP3B1O00203 AJ011931.1-201ENST00000618749 2492 ntBASIC15.58■□□□□ 0.09
AP3B1O00203 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
AP3B1O00203 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
AP3B1O00203 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC15.58■□□□□ 0.09
AP3B1O00203 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
AP3B1O00203 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
AP3B1O00203 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
AP3B1O00203 AMT-204ENST00000427987 1646 ntTSL 5 BASIC15.58■□□□□ 0.09
AP3B1O00203 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
AP3B1O00203 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
AP3B1O00203 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
AP3B1O00203 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
AP3B1O00203 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
AP3B1O00203 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
AP3B1O00203 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
AP3B1O00203 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
AP3B1O00203 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
AP3B1O00203 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC15.58■□□□□ 0.08
AP3B1O00203 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC15.58■□□□□ 0.08
AP3B1O00203 TREML5P-201ENST00000421694 576 ntBASIC15.58■□□□□ 0.08
AP3B1O00203 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC15.58■□□□□ 0.08
AP3B1O00203 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC15.58■□□□□ 0.08
AP3B1O00203 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC15.58■□□□□ 0.08
AP3B1O00203 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC15.58■□□□□ 0.08
AP3B1O00203 SAMD11P1-201ENST00000571429 661 ntBASIC15.58■□□□□ 0.08
AP3B1O00203 PRR29-204ENST00000577953 565 ntTSL 4 BASIC15.58■□□□□ 0.08
AP3B1O00203 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC15.58■□□□□ 0.08
AP3B1O00203 AC023511.2-201ENST00000618803 211 ntBASIC15.58■□□□□ 0.08
AP3B1O00203 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC15.58■□□□□ 0.08
AP3B1O00203 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
AP3B1O00203 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
AP3B1O00203 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
AP3B1O00203 RERG-209ENST00000546331 1383 ntTSL 2 BASIC15.58■□□□□ 0.08
AP3B1O00203 REXO1L4P-201ENST00000605109 1937 ntBASIC15.58■□□□□ 0.08
AP3B1O00203 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
AP3B1O00203 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
AP3B1O00203 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
AP3B1O00203 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
AP3B1O00203 AL390755.1-201ENST00000623716 2027 ntBASIC15.58■□□□□ 0.08
AP3B1O00203 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
AP3B1O00203 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
AP3B1O00203 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC15.58■□□□□ 0.08
AP3B1O00203 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC15.58■□□□□ 0.08
AP3B1O00203 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
AP3B1O00203 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC15.58■□□□□ 0.08
AP3B1O00203 LINC00528-201ENST00000600723 2160 ntBASIC15.58■□□□□ 0.08
AP3B1O00203 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
AP3B1O00203 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
AP3B1O00203 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC15.57■□□□□ 0.08
AP3B1O00203 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
AP3B1O00203 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
AP3B1O00203 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
AP3B1O00203 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
AP3B1O00203 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC15.57■□□□□ 0.08
AP3B1O00203 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC15.57■□□□□ 0.08
AP3B1O00203 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
AP3B1O00203 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
AP3B1O00203 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
AP3B1O00203 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
AP3B1O00203 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
AP3B1O00203 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
AP3B1O00203 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC15.57■□□□□ 0.08
AP3B1O00203 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
AP3B1O00203 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
AP3B1O00203 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC15.57■□□□□ 0.08
AP3B1O00203 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC15.57■□□□□ 0.08
AP3B1O00203 AC009477.1-201ENST00000452936 217 ntBASIC15.57■□□□□ 0.08
AP3B1O00203 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC15.57■□□□□ 0.08
AP3B1O00203 IGHV3-42-201ENST00000520410 361 ntBASIC15.57■□□□□ 0.08
AP3B1O00203 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC15.57■□□□□ 0.08
AP3B1O00203 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC15.57■□□□□ 0.08
AP3B1O00203 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC15.57■□□□□ 0.08
AP3B1O00203 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC15.57■□□□□ 0.08
AP3B1O00203 AC093028.1-201ENST00000622998 982 ntBASIC15.57■□□□□ 0.08
AP3B1O00203 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC15.57■□□□□ 0.08
AP3B1O00203 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC15.57■□□□□ 0.08
AP3B1O00203 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
AP3B1O00203 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
AP3B1O00203 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
AP3B1O00203 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
AP3B1O00203 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
AP3B1O00203 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
AP3B1O00203 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
AP3B1O00203 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
AP3B1O00203 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
AP3B1O00203 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
AP3B1O00203 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
AP3B1O00203 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
AP3B1O00203 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
AP3B1O00203 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
AP3B1O00203 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC15.57■□□□□ 0.08
AP3B1O00203 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC15.57■□□□□ 0.08
AP3B1O00203 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
AP3B1O00203 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
AP3B1O00203 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
AP3B1O00203 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
AP3B1O00203 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms