Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
TMX2-CTNND1H3BSU7 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC15.17■□□□□ 0.02
TMX2-CTNND1H3BSU7 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC15.17■□□□□ 0.02
TMX2-CTNND1H3BSU7 AL355864.2-201ENST00000447420 863 ntBASIC15.17■□□□□ 0.02
TMX2-CTNND1H3BSU7 CROCCP4-201ENST00000457096 498 ntBASIC15.17■□□□□ 0.02
TMX2-CTNND1H3BSU7 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC15.17■□□□□ 0.02
TMX2-CTNND1H3BSU7 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC15.17■□□□□ 0.02
TMX2-CTNND1H3BSU7 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC15.17■□□□□ 0.02
TMX2-CTNND1H3BSU7 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC15.17■□□□□ 0.02
TMX2-CTNND1H3BSU7 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC15.17■□□□□ 0.02
TMX2-CTNND1H3BSU7 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TMX2-CTNND1H3BSU7 RPS24-214ENST00000613865 538 ntTSL 5 BASIC15.17■□□□□ 0.02
TMX2-CTNND1H3BSU7 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TMX2-CTNND1H3BSU7 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC15.17■□□□□ 0.02
TMX2-CTNND1H3BSU7 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TMX2-CTNND1H3BSU7 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TMX2-CTNND1H3BSU7 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC15.17■□□□□ 0.02
TMX2-CTNND1H3BSU7 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TMX2-CTNND1H3BSU7 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TMX2-CTNND1H3BSU7 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
TMX2-CTNND1H3BSU7 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TMX2-CTNND1H3BSU7 AC007191.1-201ENST00000623179 2995 ntBASIC15.17■□□□□ 0.02
TMX2-CTNND1H3BSU7 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
TMX2-CTNND1H3BSU7 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC15.17■□□□□ 0.02
TMX2-CTNND1H3BSU7 GRN-214ENST00000589265 1632 ntTSL 5 BASIC15.17■□□□□ 0.02
TMX2-CTNND1H3BSU7 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TMX2-CTNND1H3BSU7 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TMX2-CTNND1H3BSU7 ZBTB45P2-201ENST00000452245 1531 ntBASIC15.17■□□□□ 0.02
TMX2-CTNND1H3BSU7 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC15.17■□□□□ 0.02
TMX2-CTNND1H3BSU7 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TMX2-CTNND1H3BSU7 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TMX2-CTNND1H3BSU7 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TMX2-CTNND1H3BSU7 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
TMX2-CTNND1H3BSU7 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC15.16■□□□□ 0.02
TMX2-CTNND1H3BSU7 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC15.16■□□□□ 0.02
TMX2-CTNND1H3BSU7 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TMX2-CTNND1H3BSU7 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TMX2-CTNND1H3BSU7 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
TMX2-CTNND1H3BSU7 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TMX2-CTNND1H3BSU7 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TMX2-CTNND1H3BSU7 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TMX2-CTNND1H3BSU7 UCKL1-AS1-201ENST00000623569 3602 ntBASIC15.16■□□□□ 0.02
TMX2-CTNND1H3BSU7 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TMX2-CTNND1H3BSU7 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
TMX2-CTNND1H3BSU7 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TMX2-CTNND1H3BSU7 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TMX2-CTNND1H3BSU7 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TMX2-CTNND1H3BSU7 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
TMX2-CTNND1H3BSU7 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC15.16■□□□□ 0.02
TMX2-CTNND1H3BSU7 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
TMX2-CTNND1H3BSU7 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TMX2-CTNND1H3BSU7 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
TMX2-CTNND1H3BSU7 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC15.16■□□□□ 0.02
TMX2-CTNND1H3BSU7 CTBP2P5-201ENST00000454986 1264 ntBASIC15.16■□□□□ 0.02
TMX2-CTNND1H3BSU7 FO681548.1-201ENST00000455617 1132 ntBASIC15.16■□□□□ 0.02
TMX2-CTNND1H3BSU7 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC15.16■□□□□ 0.02
TMX2-CTNND1H3BSU7 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TMX2-CTNND1H3BSU7 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
TMX2-CTNND1H3BSU7 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
TMX2-CTNND1H3BSU7 NOP2-211ENST00000540228 668 ntTSL 2 BASIC15.16■□□□□ 0.02
TMX2-CTNND1H3BSU7 SNX29P1-201ENST00000548357 1007 ntBASIC15.16■□□□□ 0.02
TMX2-CTNND1H3BSU7 AC079316.1-201ENST00000548397 411 ntBASIC15.16■□□□□ 0.02
TMX2-CTNND1H3BSU7 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
TMX2-CTNND1H3BSU7 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC15.16■□□□□ 0.02
TMX2-CTNND1H3BSU7 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC15.16■□□□□ 0.02
TMX2-CTNND1H3BSU7 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
TMX2-CTNND1H3BSU7 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.16■□□□□ 0.02
TMX2-CTNND1H3BSU7 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TMX2-CTNND1H3BSU7 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
TMX2-CTNND1H3BSU7 AMT-232ENST00000636199 1546 ntTSL 5 BASIC15.16■□□□□ 0.02
TMX2-CTNND1H3BSU7 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC15.16■□□□□ 0.02
TMX2-CTNND1H3BSU7 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TMX2-CTNND1H3BSU7 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TMX2-CTNND1H3BSU7 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TMX2-CTNND1H3BSU7 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
TMX2-CTNND1H3BSU7 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TMX2-CTNND1H3BSU7 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC15.16■□□□□ 0.02
TMX2-CTNND1H3BSU7 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TMX2-CTNND1H3BSU7 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TMX2-CTNND1H3BSU7 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
TMX2-CTNND1H3BSU7 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TMX2-CTNND1H3BSU7 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
TMX2-CTNND1H3BSU7 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
TMX2-CTNND1H3BSU7 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC15.15■□□□□ 0.02
TMX2-CTNND1H3BSU7 AC112504.1-201ENST00000623415 1841 ntBASIC15.15■□□□□ 0.02
TMX2-CTNND1H3BSU7 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TMX2-CTNND1H3BSU7 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
TMX2-CTNND1H3BSU7 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TMX2-CTNND1H3BSU7 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TMX2-CTNND1H3BSU7 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TMX2-CTNND1H3BSU7 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
TMX2-CTNND1H3BSU7 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TMX2-CTNND1H3BSU7 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TMX2-CTNND1H3BSU7 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TMX2-CTNND1H3BSU7 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TMX2-CTNND1H3BSU7 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TMX2-CTNND1H3BSU7 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
TMX2-CTNND1H3BSU7 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TMX2-CTNND1H3BSU7 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
TMX2-CTNND1H3BSU7 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms