Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TBC1D3FA6NER0 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC15.28■□□□□ 0.04
TBC1D3FA6NER0 AC063926.3-201ENST00000624734 5658 ntBASIC15.28■□□□□ 0.04
TBC1D3FA6NER0 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TBC1D3FA6NER0 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TBC1D3FA6NER0 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
TBC1D3FA6NER0 MIR326-201ENST00000362220 95 ntBASIC15.28■□□□□ 0.04
TBC1D3FA6NER0 RPL5P21-201ENST00000404620 815 ntBASIC15.28■□□□□ 0.04
TBC1D3FA6NER0 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC15.28■□□□□ 0.04
TBC1D3FA6NER0 CD8B2-202ENST00000417670 633 ntBASIC15.28■□□□□ 0.04
TBC1D3FA6NER0 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TBC1D3FA6NER0 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC15.28■□□□□ 0.04
TBC1D3FA6NER0 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC15.28■□□□□ 0.04
TBC1D3FA6NER0 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
TBC1D3FA6NER0 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
TBC1D3FA6NER0 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TBC1D3FA6NER0 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC15.28■□□□□ 0.04
TBC1D3FA6NER0 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC15.28■□□□□ 0.04
TBC1D3FA6NER0 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC15.28■□□□□ 0.04
TBC1D3FA6NER0 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC15.28■□□□□ 0.04
TBC1D3FA6NER0 RN7SL48P-201ENST00000579283 293 ntBASIC15.28■□□□□ 0.04
TBC1D3FA6NER0 MIR4741-201ENST00000579822 90 ntBASIC15.28■□□□□ 0.04
TBC1D3FA6NER0 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC15.28■□□□□ 0.04
TBC1D3FA6NER0 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC15.28■□□□□ 0.04
TBC1D3FA6NER0 MIR6787-201ENST00000616675 61 ntBASIC15.28■□□□□ 0.04
TBC1D3FA6NER0 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC15.28■□□□□ 0.04
TBC1D3FA6NER0 AL645728.2-202ENST00000641679 227 ntBASIC15.28■□□□□ 0.04
TBC1D3FA6NER0 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TBC1D3FA6NER0 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TBC1D3FA6NER0 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
TBC1D3FA6NER0 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TBC1D3FA6NER0 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TBC1D3FA6NER0 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TBC1D3FA6NER0 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TBC1D3FA6NER0 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TBC1D3FA6NER0 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TBC1D3FA6NER0 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TBC1D3FA6NER0 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TBC1D3FA6NER0 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TBC1D3FA6NER0 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
TBC1D3FA6NER0 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TBC1D3FA6NER0 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
TBC1D3FA6NER0 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
TBC1D3FA6NER0 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
TBC1D3FA6NER0 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
TBC1D3FA6NER0 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC15.27■□□□□ 0.04
TBC1D3FA6NER0 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
TBC1D3FA6NER0 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
TBC1D3FA6NER0 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC15.27■□□□□ 0.04
TBC1D3FA6NER0 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TBC1D3FA6NER0 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
TBC1D3FA6NER0 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TBC1D3FA6NER0 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC15.27■□□□□ 0.04
TBC1D3FA6NER0 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TBC1D3FA6NER0 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC15.27■□□□□ 0.04
TBC1D3FA6NER0 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
TBC1D3FA6NER0 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC15.27■□□□□ 0.04
TBC1D3FA6NER0 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC15.27■□□□□ 0.04
TBC1D3FA6NER0 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC15.27■□□□□ 0.04
TBC1D3FA6NER0 PFN2-215ENST00000497148 743 ntTSL 4 BASIC15.27■□□□□ 0.04
TBC1D3FA6NER0 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC15.27■□□□□ 0.04
TBC1D3FA6NER0 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TBC1D3FA6NER0 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TBC1D3FA6NER0 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC15.27■□□□□ 0.04
TBC1D3FA6NER0 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.03
TBC1D3FA6NER0 LTF-203ENST00000426532 2494 ntTSL 2 BASIC15.27■□□□□ 0.03
TBC1D3FA6NER0 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC15.27■□□□□ 0.03
TBC1D3FA6NER0 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TBC1D3FA6NER0 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
TBC1D3FA6NER0 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC15.27■□□□□ 0.03
TBC1D3FA6NER0 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
TBC1D3FA6NER0 AP005117.1-202ENST00000581724 1908 ntBASIC15.27■□□□□ 0.03
TBC1D3FA6NER0 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TBC1D3FA6NER0 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC15.27■□□□□ 0.03
TBC1D3FA6NER0 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TBC1D3FA6NER0 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC15.27■□□□□ 0.03
TBC1D3FA6NER0 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TBC1D3FA6NER0 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TBC1D3FA6NER0 KRT8P14-201ENST00000414254 1442 ntBASIC15.26■□□□□ 0.03
TBC1D3FA6NER0 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC15.26■□□□□ 0.03
TBC1D3FA6NER0 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TBC1D3FA6NER0 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
TBC1D3FA6NER0 AC020907.1-201ENST00000616460 1350 ntBASIC15.26■□□□□ 0.03
TBC1D3FA6NER0 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
TBC1D3FA6NER0 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TBC1D3FA6NER0 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TBC1D3FA6NER0 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TBC1D3FA6NER0 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TBC1D3FA6NER0 AC009090.5-201ENST00000624886 2285 ntBASIC15.26■□□□□ 0.03
TBC1D3FA6NER0 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TBC1D3FA6NER0 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
TBC1D3FA6NER0 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TBC1D3FA6NER0 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TBC1D3FA6NER0 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TBC1D3FA6NER0 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TBC1D3FA6NER0 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TBC1D3FA6NER0 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
TBC1D3FA6NER0 BTBD6P1-201ENST00000412176 1267 ntBASIC15.26■□□□□ 0.03
TBC1D3FA6NER0 Z93015.1-201ENST00000451718 390 ntBASIC15.26■□□□□ 0.03
TBC1D3FA6NER0 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 148.9 ms